Equus caballus (horse): 100066586
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Entry
100066586 CDS
T01058
Symbol
KRT42
Name
(RefSeq) keratin, type I cytoskeletal 42
KO
K07604
type I keratin, acidic
Organism
ecb
Equus caballus (horse)
Pathway
ecb04915
Estrogen signaling pathway
ecb05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
100066586 (KRT42)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
100066586 (KRT42)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecb04812
]
100066586 (KRT42)
04147 Exosome [BR:
ecb04147
]
100066586 (KRT42)
Cytoskeleton proteins [BR:
ecb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100066586 (KRT42)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100066586 (KRT42)
Exosomal proteins of other body fluids (saliva and urine)
100066586 (KRT42)
Exosomal proteins of colorectal cancer cells
100066586 (KRT42)
Exosomal proteins of melanoma cells
100066586 (KRT42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
DUF1664
ATG14
SDH_beta
DUF4407
RasGAP_C
CC2-LZ
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
100066586
NCBI-ProteinID:
XP_014592260
Ensembl:
ENSECAG00000015705
LinkDB
All DBs
Position
11:21221540..21230729
Genome browser
AA seq
453 aa
AA seq
DB search
MAATTTTIRQFSTSGSLKGLCMPSGGFSRVSSVHVGGACRAPSFLGTGSLGNTSVTSSRF
SAGLGGGYSGGYTCNLGGGFGSSFGVGDALLGGGEKETMQNLNDRLASYLEKVRALEEAN
TDLEVKIRDWYKKQGPSPARDYSHYFKIIEELRSKILAATMDNASFVLQIDNARLAADDF
RTKYETELTLRMNVEADINGLRRVLDELTLARADLEMQIENLKEELAYMRKNHEEEMNAL
RGQVGGDVSVEMDAAPGVDLSRILNEMRDQYEKMAEKNRKDAEDWFFSKTEELNREVATS
TEALQSSRTEITELRRSVQNLEIELQSQLSMKSSLEGSLAETEARYGTQLAQLQGLISSI
EQQLCELRCDMERQNHEYKVLLDVKTRLEQEITTYRRLLEGEDAHLATHYSSSLASQPTR
EASVTSRQVRTIVEEVQDGKVVSTREQVHRSTH
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccaccaccaccatccgtcagttctcaacctccggctccctcaagggcctg
tgtatgcccagcgggggtttctctcgggtgtcctcagtccatgtcgggggtgcctgcagg
gcgcccagcttcctgggaactggcagccttggcaacacgtcggtcacctcgtcccgcttc
tcggcaggcttgggaggcggctacagtgggggctacacctgcaacctgggcgggggcttc
ggctccagctttggcgtgggggatgccctgctggggggcggcgagaaggagaccatgcag
aacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccctggaggaggccaac
accgacctggaggtgaagatccgagactggtacaagaagcaggggcccagccccgcccgc
gactacagccactacttcaagatcatcgaggagctgcgaagcaagatcctggcagccacc
atggacaatgccagcttcgtgctgcagattgacaatgcccgcctggcagccgacgacttc
cgcaccaagtacgagacggagctgaccctgcgcatgaacgtggaggccgacatcaacggc
ctgcgcagggtgctggacgagctgaccctggccagagccgacctggagatgcagatcgag
aacctcaaggaggagctggcctacatgaggaagaaccacgaggaggaaatgaacgccctt
cgaggccaggtgggtggggacgtcagcgtggagatggacgcggctcctggcgtggacctg
agccgcatcctgaacgagatgcgcgaccagtacgagaagatggcggagaagaaccgcaaa
gacgcggaggactggttcttcagcaagacggaggagctgaaccgggaggtggccaccagc
accgaggccctgcagagcagcaggacggagatcacggagctccgccgctccgtgcagaac
ctggagatcgagctgcaatcccagctcagcatgaaatcatcgctggagggcagcctggca
gagactgaggcccgctatgggacccagctggcccagctgcaggggctcatcagcagcatt
gagcagcagctgtgcgagctgcgctgtgacatggaacgccagaaccatgagtacaaggtg
ctgctggacgtgaagacacggctggagcaggagattaccacctaccgccggctgctggag
ggagaggacgcccacctggccacccattactcctcgtccctggcctcacagcccacccgg
gaagcctcggtcaccagccgccaggtgcgcaccatcgtggaggaagtccaggatggcaag
gtggtctccacccgcgagcaggtccaccgctccacccactga
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