Equus caballus (horse): 100066771 Help Entry 100066771         CDS       T01058                                  Symbol CDC40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism ecb  Equus caballus (horse) Pathway ecb03040   Spliceosome Brite KEGG Orthology (KO) [BR:ecb00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100066771 (CDC40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ecb03041]     100066771 (CDC40) Spliceosome [BR:ecb03041]  Complex C   Other components    Step II factors     100066771 (CDC40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WDR55 EIF3I WD40_WDHD1_1st WD40_Gbeta WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41 PQQ_2 Motif Other DBs NCBI-GeneID:  100066771 NCBI-ProteinID:  XP_001916161 Ensembl:  ENSECAG00000024440 VGNC:  16295 LinkDB All DBs Position 10:60910390..60958501 Genome browser AA seq 579 aa AA seqDB search MSAAIAALAASYGSGSGSESDSDSEGGRCPLPAADSLMHLTKSPSAKPSLAVAVDSAPEV AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD NT seq 1740 nt NT seq  +upstreamnt  +downstreamnt atgtcggctgcgattgcagctctggcagcttcctatggttcgggttcagggtccgaatcg gactcggacagtgagggcggacggtgtccgctgccagccgccgactctctcatgcacttg acgaaatcgccttcggccaagccctctctggcggtggcggtggactcggctccggaggtg gcagttaaggaagacttggagactggagttcaccttgaccctgctgttaaagaggttcag tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg acacagcaaatggctgcccctagaaatatgctttctgggtatgctgaaccagctcatatc aatgattttatgtttgaacagcaaagaagaacttttgccacatatggttatgcattggac ccttcgttagataatcatcaagtgtctactaaatatattggctctgtagaagaagctgaa aaaaatcaaggtttaactgtgtttgaaactggtcagaagaaaatagaaaagaggaaaaag ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccatgggcaaaatatgtg gatgaaaaagatgtagccaaaccttcagaagaagaacaaaaagaattggacgaaatcaca gcaaagaggcagaaaaaaggcaaacaagaagaagagaaacctggggaggaaaagacaatc ttacatgttaaagaaatgtatgactatcaaggcaggtcctatcttcacatacctcaggat gttggtgtcaatctgcggtcaactgtgccacctgagaagtgttatcttcccaaaaaacaa attcatgtgtggtccggacacacaaagggcgtcagcgcagtcagactgtttcctctctcc ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgga gacaggcgctgtctgcgaacatttattggtcacagtaaagctgtgagggacatctgcttt aatactgcagggacacagttcctcagcgcagcttacgacaggtatctgaagctctgggac actgagacaggacagtgtatatcaagatttacaaatcgaaaagtaccctactgtgtcaaa tttaatcctgatgaagataagcaaaatctctttgtggctgggatgtctgataaaaagatt gtgcaatgggacattcgaagtggagaaattgtgcaggaatatgatcggcatttgggagct gtcaacaccattgtttttgttgatgaaaataggagatttgtgagcacatctgatgataag agcctaagagtttgggaatgggatatccctgtggatttcaagtatatagcagaacccagt atgcactcaatgcccgcagtgactttgtctccaaatgggaaatggctagcatgccaatca atggacaaccaaatcttaatttttggagcacagaacagatttagattaaataagaaaaaa atctttaagggccatatggtagcaggctatgcttgtcaggtggacttttccccagacatg agttatgtgatttcaggagatggaaatggaaaattaaatatctgggactggaagaccaca aaactctacagccggtttaaagctcatgataaagtgtgtatcggtgcagtgtggcatcct cacgaaacctccaaagtcatcacgtgtggttgggatggcctcattaaactgtgggattaa

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