Equus caballus (horse): 100066955
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Entry
100066955 CDS
T01058
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100066955 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100066955 (CLP1)
Enzymes [BR:
ecb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100066955 (CLP1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100066955 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
ATP_bind_1
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
100066955
NCBI-ProteinID:
XP_001497158
Ensembl:
ENSECAG00000011597
VGNC:
16628
UniProt:
A0A3Q2HKP3
LinkDB
All DBs
Position
12:21247197..21251254
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AA seq
425 aa
AA seq
DB search
MGEEASDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccagtgatgacaagaagccaacaactaaattcgaactagagcgagaa
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagctgctgactggc
atggcagaaatcttcggcacagagctgacccgaaacaagaaattcacctttgatgctggt
gccaaggtggcagttttcacttggcatggctgttctgtacagctgagtggccgcactgaa
gtggcttatgtctccaaggatacccctatgttgctttacctcaacactcatacagccttg
gagcagatgcggaggcaggcggagaaggaagaagagcgagggccccgggtgatggtagtg
ggccccactgatgtgggcaagtccacagtgtgccgtctactgctcaactatgcagtgcgt
ttgggccgccgtcccacttatgtggagctggatgtaggccagggctctgtgtccattcct
ggtaccatgggggccctctacattgagcggccagcagacgttgaagagggattctctatc
caggcccctttggtatatcattttggctccactactcctggcaccaacatcaagctttat
aataagattacatctcgtttagcagatgtgttcaaccaacggtgtgaagtgaaccgaagg
gcctctgtgagtggctgtgtcattaacacctgtggctgggtcaagggctcaggttaccag
gccctggtgcatgcagcctcagcctttgaggtggatgtggttgtggttctggatcaagaa
cgactgtacaatgaactgaaacgggacctgcctcactttgtacgcactgtgctgctcccc
aaatcagggggtgtggttgagcgctccaaagacttccggcgggaatgtagggatgagcgt
attcgtgagtatttctacggattccggggctgtttctatccccatgccttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtttgcct
ttgggcatgtctcaggaggacaatcagctcaagctagtacctgtcacccctggccgagat
atggtgcaccacctcctgagtgtgagcactgctgagggcacagaggagaacctttctgag
acaagtgtggctggcttcattgtggtgaccagtgtggacctagagcatcaggtgtttacc
gttctctctccagcccctcgcccactgcctaagaacttccttctcatcatggatatccgg
ttcatggatcttaagtag
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