Equus caballus (horse): 100066959
Help
Entry
100066959 CDS
T01058
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100066959 (COL10A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
100066959
NCBI-ProteinID:
XP_001504151
Ensembl:
ENSECAG00000020826
VGNC:
16720
UniProt:
F6WCC9
LinkDB
All DBs
Position
10:complement(65866130..65873846)
Genome browser
AA seq
674 aa
AA seq
DB search
MLPQTALVLLLTLNLVHGEFYAERYQTPTGIKGPPPNIKTRFFIPYAIKSKGVSVRGEQG
VPGPPGPSGPRGHPGPSGPPGKPGYGSPGPQGEPGLPGPPGPSATGKPGVPGLPGKQGER
GPYGPKGDIGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGLPGEKGAPG
VPGMNGQKGETGYGAPGRPGERGLPGPQGPMGPPGSPGVGKRGENGFPGQPGTKGDQGIP
GERGPIGPPGPQGPPGEQGPEGIGKPGAPGAPGQAGIPGTKGHPGAPGIAGPPGAPGFGK
PGLPGLKGQRGPIGLPGSPGAKGEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNHGIPGP
KGETGPVGPAGQPGAKGERGFSGLDGKPGYPGEPGLNGPKGNPGLPGPKGEPGIGGPPGL
PGPVGPVGAKGVPGNNGEAGPRGAPGIPGTRGPIGPPGIPGFPGPKGDRGTPGLPGPAGI
ATKGLNGPTGPPGPPGPKGHAGEPGLPGPPGPPGPPGQAVVPEGFIKAGQRPLVSANQGV
TGMPVSAFTVILSKAYPAIGAPIPFDKIVYNRQQHYDPRTGIFTCRIPGIYYFSYHVHAK
GTHVWVGLYKNGTPVMYTYDEYIKGYLDQASGSAVLDLTENDQVWLQLPNAESNGLYSSE
YVHSSFSGFLVAPM
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgctgccacaaacagcccttgtgctgctactgaccttgaacttggttcatggcgagttt
tatgctgagaggtatcaaacacctacaggcataaaagggccaccacccaacatcaagacc
cggttcttcattccctatgccataaagagtaaaggtgtatcagtgagaggagaacaaggt
gttcctggtccaccaggccccagtggacctcgagggcacccaggaccatctggaccacca
ggaaaaccaggttatggaagccctggaccccaaggagagccagggttgccaggaccacca
ggaccatcagccactgggaagccaggtgtgccaggactcccaggaaaacaaggggagaga
ggaccatatggaccaaaaggagacattggaccagctggtttaccaggaccacggggccca
cccgggccacctggaatccccggcccggctggaatttctgttccaggaaaacctggacaa
cagggacctacaggagccccaggacccagaggccttcctggagaaaagggtgcaccaggt
gtccctggtatgaacggacagaaaggggaaacgggatatggtgctcctggtcgcccaggt
gagagaggccttccaggcccacagggtcccatgggaccacccggctctcctggagtggga
aaaagaggtgaaaatgggtttccaggacagccaggcaccaaaggtgatcagggcattccg
ggagaaaggggaccaattggcccaccaggtccccaaggtcctcctggggaacaaggacca
gaaggcattggaaagccaggcgcccctggagctccaggccaggcagggattccaggaaca
aaaggacaccctggggctccaggaatagctgggccaccaggggctcctggctttgggaaa
ccaggcttgccaggcctgaaggggcaaagaggacctattggccttccaggaagtccaggt
gccaaaggggagcaaggcccagcaggtcatcctggggagccaggtctgactggaccccct
ggaaatatgggaccccaaggaccaaaaggcatcccaggcaaccatgggatcccaggccct
aaaggtgagacagggccagtggggcctgcaggacagcctggggctaagggagaaaggggt
ttctctgggttagatggaaaaccagggtacccaggagaaccaggtctcaatggtcctaag
ggtaacccagggttgccaggcccaaaaggtgagcctggaattggaggacctcctggtctc
ccaggccctgtgggcccagtaggagctaagggagtgcctggaaacaatggtgaggctggt
ccaagaggtgcccctggaataccaggtaccagaggtcccattgggccaccaggcattcca
ggattccctggacctaaaggtgatcgaggaactccaggtcttcctggtccagctggcata
gcaactaagggactcaatggacccactgggccaccagggcctccaggtccaaaaggccat
gctggagaacctggcctcccaggtcccccaggccccccaggccccccaggccaagcagtt
gtgcctgagggctttataaaggcaggccaaaggcctcttgttagtgccaaccagggtgta
acaggaatgcctgtgtctgctttcactgttattctctccaaagcttacccagcaataggt
gctcctatcccctttgataagattgtgtataacaggcaacagcattacgacccaagaact
ggaatctttacctgcaggataccaggaatatactatttctcctaccacgtgcatgcgaaa
gggacccatgtttgggtgggcctgtataagaacggcaccccagtaatgtacacctatgat
gaatatatcaaaggctacctggatcaggcttcagggagtgccgtcctcgatctcacagaa
aatgaccaggtgtggctccagctgcccaatgccgagtcgaatggcctgtactcctcagag
tacgtccactcctctttctcaggattcttagtggctcccatgtga
DBGET
integrated database retrieval system
