Equus caballus (horse): 100067071
Help
Entry
100067071 CDS
T01058
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100067071 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100067071 (POLR1A)
Enzymes [BR:
ecb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100067071 (POLR1A)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100067071 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
100067071
NCBI-ProteinID:
XP_001916227
Ensembl:
ENSECAG00000010092
VGNC:
21668
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQGVYELERILNRFLEENSDPTAFEIQEELEQYTTKIVQNNLLGSHGAH
VKNVCESRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKADQKDT
EPPGIEEAQMGKRGYLTPTSAREHLITLWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCNVAASAA
HEEKDSSMPVDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRG
LTDKVGRVKLFSPAILKPFPLWTGKQVVSTLLINIIPEDCIPLNLSGKAKISGKAWVKEP
PRPVPGFHPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRRRIVEESTHCGPRAVRAALNLPEAASCD
EVREKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSKHP
NILLRKGAFLNYSQKIQAAVKASNVEGGNQNGRSPGTHQMLRMWGELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKVDDYSHEWASQAERSYEKSELSLDRLRTLLQLKW
QRALCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVEESFCMGEKQNKFRVYQLRFQ
FLPHAYYQQEKCLRPEDILHFMETRFFKILMEAIRKKNNKASAFRSVNTRRATQRDLDNA
GESERIRGEQEGDEEEEGRIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEKEGEEN
DDDDVQEEGPVCGEGPRKAQKQDEEVGSGPEEDSPPAAPLTQPRKPTRTREPQGAEAVER
RVQAVRESHSFIEDYQYDTEENLWCQVTVKLPLMKINFDMSSLVVSLAHDAVVYTTKGIT
RCLLNETTNNRNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATMMGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttcatttgggatgtat
tcggctgaagagctcaagaaattaagtgttaagtccattacgaaccctcgatacctggac
agcctggggaacccatcagtgaatggcctatacgatttagctttgggccccgcggactcc
aaagaggtgtgctccacctgtgtgcaggacttcaacaactgctccggccacctgggccac
attgagcttccactcaccgtgtacaaccctctcctcttcgataaactctacctgctgctc
cggggctcctgtttgaactgccacatgctgacttgcccccgggctgtgattcacctctta
gtctgccagctgagagttctggaggtcggggccctgcaaggagtgtatgagctggagaga
attctgaacaggtttctagaagaaaactctgatcctaccgcgtttgaaattcaggaagag
ttagaacagtatacaaccaaaattgtacagaacaacctcctgggatcccatggtgcacat
gtgaaaaatgtctgtgagagcaggagcaaactcattgcttacttctggaaggcacatatg
actgctaagcgatgtccccactgcaaaactgggcggtcagtcgtccgaaaggagcacaac
agcaaactgacaatcacgtatccagccatggtgcacaggaaagctgaccagaaggacacg
gagcccccaggaattgaggaggctcagatggggaaacgagggtacctgacacccaccagc
gctcgagagcatcttatcaccctttggaagaatgaaggattctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccagattcaatcccagtatgttctttctggat
ttcttggtggtgccaccctcaaggtatcgccctgtcagccgcctgggggatcagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggacatggtcctaatccgaaag
ctgctggcgttgatggcccaagaacaggagctgccgtgtaatgtggcagcatctgccgca
catgaggaaaaagactcttcgatgcctgtggaccgatcctttttgagtatgcttccaggc
cagtccctcacagacaaactttataatatctggattcgccttcagagccatgtcaatatt
gtgtttgatagcgaaatggacaaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggcttattccgaaagcacatgatgggaaagcgagtagactacgca
gcccgctcagtcatctgcccggacatgtacatcaacactaacgaaattggaattcccatg
gtgtttgcgacaaaactgacctaccctcagccagttaccccctggaatgttcaggaactg
aggcaagcagtcatcaatggccctaatgtgcacccaggagcctccatggtcatcaacgag
gatggcagtcgtacagccctaagtgccgtggacctaacccagcgggaagctgtggccaag
cagcttctgacaccagccacaggggcccccaagccccaagggacaaaaattgtgtgccgg
catgtgaaaaatggggacattctcttactgaaccgacagcccaccctgcacagaccctcc
atccaggcgcaccacgcccgcatcctgcccgaagagaaagtcctccggctccactatgcc
aactgcaaggcttataacgccgactttgatggagacgagatgaacgcccacttcccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcacggatcagcagtaccttgtt
cccaaggatggccaaccactggctgggttgatacaagatcacatggtttcgggtgcaaac
atgactattcgcggttgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtgggacgcgtgaagctcttctctcctgccatcctgaagccctttcca
ctgtggacaggaaagcaggttgtgtcgacgctgctcataaacataatcccagaggactgc
atcccactgaacttatcgggaaaggcgaagatcagcgggaaggcctgggtgaaggagcct
ccacggcctgtccccggctttcaccccgactccatgtgtgagtcccaggtgatcatcagg
gcaggggagctgctctgcggcgtgctggacaaggcacactacgggagctctgcctatggc
ctggtccactgctgctacgagatctatggtggggagaccagtggcaaggttctcacctgc
ctggcccgcctcttcactgcctacctgcaactctacagaggcttcaccttgggcgtggaa
gacattctggttaagccgaaggcggatgtcaggagacgcaggatcgttgaagagtccacc
cactgcgggccccgggctgtcagggctgcattaaaccttccagaagccgcctcctgtgat
gaggtccgagagaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcgtgc
atgccttttggcctgcacagacagttcccagagaacaacttgcagatgatggtgcagtct
ggagccaaaggttccactgtgaacaccatgcagatctcgtgcctgctgggccagattgaa
ttggaaggtcggagacccccactgatggcgtctggcaagtcactgccctgctttgagcct
tatgaattcacccccagggctggtggttttgtcactggcagattcctcaccggcatcaag
cctcctgagttcttctttcactgcatggcagggcgagagggtctggtcgacaccgcggtg
aaaaccagccgctccggctatctgcagaggtgcatcatcaaacacctggaggggctggtc
gtccagtacgacctgaccgtccgcgacagcgacggcagcgtggtgcagttcctctatggg
gaggatggcctggacatccccaagacacagttcctgcagcccaagcagttccccttcctc
gctagcaactacgaggtgataatgaaatcgaagcacctccatgaagttttatccagagca
gatccccaaaaagctctccgccacttcagagccatcaaaaaatggcagagcaagcatccc
aacatcctgctgagaaaaggcgccttcttgaattattcccagaaaattcaggcagctgtg
aaagcctcgaatgtcgagggtgggaaccagaacggccgcagccccgggactcaccagatg
ttgaggatgtggggcgagttagatgagcagagccgaaggaaataccagaaaaaggcggct
ccttgtcctgaccccagtctgtctgtctggcgcccagacatctactttgcatcagtgtcg
gaaacatttgaaaaaaaggtggatgactacagtcacgagtgggcatctcaagcagaaagg
agttatgagaaatcagagctttctctcgacaggttgaggaccctgctgcaattgaagtgg
cagcgcgcactgtgtgaccccggtgaggctgtggggctgctggctgcacagagcatcggg
gagccctccacacagatgaccctgaacaccttccactttgccggcagaggcgagatgaat
gtcaccctgggcattccaaggttgagggagattctcatggtggccagcgccaacatcaaa
acgcctatgatgagcgtgcctgtgctcaacaccaagaaagcactgaagagagtgaaaagc
ctgaagaagcagctcaccagggtgtgcttaggggaggtgttgcagaaaattgatgtcgag
gagtctttctgtatgggagaaaagcaaaacaagttccgggtgtaccagctgcgatttcag
ttcctgccacatgcgtattaccagcaggagaagtgcctgagacctgaggacatcctgcac
ttcatggaaactagattctttaaaattctgatggaagccatcagaaagaagaataataaa
gcatcagctttcagaagcgtcaacactcgcagagctactcagcgggatctagacaacgct
ggggagtcagagaggatccggggagaacaggaaggggatgaggaggaagagggacgcatt
gtggatgctgaagctgaggagggagacgctgatgcctctgatgccaaacgcaaggagaag
caagaggaggaggtggattatgagagcgaagaagaggaggagaaggagggggaggaaaac
gatgatgacgatgtgcaggaggaaggcccagtctgtggggagggcccccgcaaggcccag
aagcaggatgaagaggtgggctcaggccccgaggaggactcgcctcctgctgcccccctg
acacagccccggaaacccacccgcacccgggagccccaaggagctgaggccgtggagcgc
cgggtacaggctgtgcgtgagtcccactcgttcatcgaggactaccagtacgacacggag
gagaacctgtggtgtcaggtgacggtaaagctccctctaatgaagattaacttcgacatg
agttccctggtggtgtccttggcccatgacgccgtcgtctacacgaccaagggcatcaca
aggtgcctcctgaatgaaactaccaacaataggaatgagaaggagcttgtcttaaacaca
gagggcatcaacctcccggagctgttcaagtacgctgaggttctggatttgcgccgcctg
tattccaacgacatccacgccatggccagcacgtatggcatcgaggccgcactgcgggtg
attgagaaggagatcaaggacgtctttgctgtgtacggcattgcggtcgacccccgccac
ctctccctggttgctgactacatgtgcttcgagggtgtttacaagccactgaatcgcttt
gggatccggtcgaactcctcccctctgcagcagatgacatttgaaaccagcttccagttt
ctgaagcaggccaccatgatgggatcccatgatgagctgaggtccccttccgcctgcctt
gtggtcgggaaggtcgtcaggggcgggaccggcctgttcgagctcaagcagcccctgaga
tag
DBGET
integrated database retrieval system
