Equus caballus (horse): 100067330
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Entry
100067330 CDS
T01058
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb04260
Cardiac muscle contraction
ecb04261
Adrenergic signaling in cardiomyocytes
ecb04814
Motor proteins
ecb04820
Cytoskeleton in muscle cells
ecb05206
MicroRNAs in cancer
ecb05410
Hypertrophic cardiomyopathy
ecb05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100067330 (TPM1)
04820 Cytoskeleton in muscle cells
100067330 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
100067330 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
100067330 (TPM1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100067330 (TPM1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100067330 (TPM1)
05414 Dilated cardiomyopathy
100067330 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecb04812
]
100067330 (TPM1)
04147 Exosome [BR:
ecb04147
]
100067330 (TPM1)
Cytoskeleton proteins [BR:
ecb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
100067330 (TPM1)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of microglial cells
100067330 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
ERM_helical
Laminin_I
Lebercilin
ATG16
TMF_DNA_bd
GAS
CENP-F_leu_zip
DUF745
DUF1664
XhlA
AAA_13
DUF16
FPP
Motif
Other DBs
NCBI-GeneID:
100067330
NCBI-ProteinID:
XP_023471914
VGNC:
51814
LinkDB
All DBs
Position
1:complement(130292858..130319974)
Genome browser
AA seq
298 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAE
FAERSVTKLEKSIDDLEDKFLCFTSPKTLSSSWTFHLSELCGLSLLQLSLALSVSFLP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcaaatgctgaagctcgacaaggagaacgccttggat
cgagcggagcaggcagaggccgataagaaggcggctgaggacaggagcaaacagctggaa
gatgagctagtgtcgctgcaaaagaaactcaagggcaccgaagatgaactggacaaatac
tccgaggctctcaaagatgcccaggagaagctggagctggcggagaaaaaggccaccgac
gctgaagccgatgtggcctctctgaacagacgcatccagctggttgaggaagagctggat
cgtgcccaggagcgtctggccacagccctgcagaagctggaggaagccgagaaggcagca
gatgagagcgagagaggcatgaaagttattgagagccgagcccaaaaggatgaagagaaa
atggaaattcaggagatccaactgaaagaggccaagcacattgctgaagatgccgaccgc
aagtatgaagaggtggcccgtaagctggtcatcattgagagtgacttggaacgtgcagag
gaacgggctgagctctcagaaggcaaatgtgccgagcttgaagaagaattgaaaactgtg
acgaacaacttgaagtcactggaggctcaggctgagaagtactcacagaaggaagacaaa
tatgaggaagagatcaaggtcctttctgacaagctgaaggaggctgagactcgggctgaa
tttgcagagaggtcagtaactaaattggagaaaagcattgatgacttagaagataagttt
ctttgcttcacttctcccaagaccctttcatcaagctggacgttccacctctctgagctc
tgcggtttgtctcttctccagctgagcctggctctttctgtcagcttcctgccgtag
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