Equus caballus (horse): 100067336
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Entry
100067336 CDS
T01058
Symbol
YBX1
Name
(RefSeq) nuclease-sensitive element-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100067336 (YBX1)
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100067336 (YBX1)
03041 Spliceosome [BR:
ecb03041
]
100067336 (YBX1)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
100067336 (YBX1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100067336 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
100067336 (YBX1)
Spliceosome [BR:
ecb03041
]
Common components
Common spliceosomal components
General mRNP proteins
100067336 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
100067336
NCBI-ProteinID:
XP_023487994
Ensembl:
ENSECAG00000023592
VGNC:
25095
UniProt:
F7C883
LinkDB
All DBs
Position
2:complement(15774903..15794582)
Genome browser
AA seq
324 aa
AA seq
DB search
MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVL
GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA
EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG
QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG
YRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKAADPPAENSSAPEAEQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagcagccgcccgccgccccccccgccgcccccgccctc
agcgctgccgacaccaagcccggcaccacgggcagcggcgcagggagcggcggcccgggc
ggcctcacatcggcggcgcctgccggcggggacaagaaggtcatcgcaacgaaggttttg
ggaacagtaaaatggttcaatgtaagaaacggatatggtttcatcaacaggaatgacacc
aaggaagatgtatttgtacaccagactgccataaagaagaataaccccaggaagtacctt
cgcagtgtaggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcg
gaggcagcaaatgttacaggccctggtggagttccagtgcaaggcagtaaatatgcagca
gaccgtaaccattatagacgctatccacgtcgcaggggtcctccacgcaattaccagcag
aattaccagaatagtgagagtggggaaaagaatgagggatcggagagcgctcccgaaggc
caggctcaacagcgccggccctaccgcaggcgacggttcccaccttactacatgcggaga
ccctatgggcgtcgaccacagtattccaaccctcctgtgcaaggagaagtgatggagggt
gctgacaaccagggtgcaggagaacaaggtagaccagtgaggcagaatatgtatcggggt
tatagaccacgattccgcaggggccctcctcgccaaagacagcctagagaggatggcaat
gaagaagataaggaaaatcaaggagatgagacccaaggtcagcagccacctcaacgtcgg
taccgccgcaacttcaattaccgacgcagacgcccagaaaaccctaaaccacaagatggc
aaagagacaaaagcagccgatccaccagctgagaattcgtccgctcccgaggctgagcag
ggcggggctgagtaa
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