Equus caballus (horse): 100067505
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Entry
100067505 CDS
T01058
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100067505 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100067505 (WDR33)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100067505 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
Collagen
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
100067505
NCBI-ProteinID:
XP_001504985
Ensembl:
ENSECAG00000000691
VGNC:
24990
UniProt:
A0A3Q2HDP2
LinkDB
All DBs
Position
18:3019517..3115756
Genome browser
AA seq
1330 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDLHGPQGLQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHMGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGMQGPPPQGSML
GPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPISFQQQK
TALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHH
MGPMSERRHEQSSGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFG
HRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGRRPGDER
FSRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASDEAARGR
DLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPRPDHPPH
DGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGKGRGGPG
PSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMNSGPPRR
GASRGGGRGR
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaatcggttctcctcctcgttttttccatatgccaaggttccagcaccag
gcgcctcgacaactgttttataagcgacctgattttgcacaacagcaagcaatgcaacaa
cttacctttgatggaaaacgaatgagaaaagcagtaaaccgaaaaaccatagactataat
ccatctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcga
gcaattcagcctgatgcaggttactataatgatctggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacgaaatttgttcgaacatcaacaaataaagtcaaatgt
ccagtatttgttgttaggtggactccagaaggaagacggttggttactggagcttctagt
ggagagttcaccttgtggaatggactcactttcaattttgaaacaatattacaggctcac
gatagtccagtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgctgatgtgaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccgatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aattggctactcacagcatcacgtgaccatctttgtaaacttttcgatatacgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaggccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtgggggttctgatggctctttgttattctggcat
gttggggtagagaaggaggtgggtggaatggagatggcccatgaaggaatgatctggagt
ctggcttggcatcctcttggacatattctctgctcaggctcaaatgaccacactagcaaa
ttctggacccgaaaccgaccaggtgataaaatgcgagatcgatataatctaaacctgtta
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaatagccttgcagta
attccagggatgggaataccggaacaactaaaattagctatggaacaagagcagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttagattggggaatggaggag
gtgatgcaaaaggatcagaaaaaagtacctcagaagaaagttccttatgcaaaacctatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgccccaaatgag
gtgctgaatgacagaaaagaggatattaaattggaagagaagaaaaaaacacaagcagaa
attgaacaagaaatggctacattacagtatactaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagcctcctccttcatctggcacc
cctctcctcggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagccccatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccccagggtcaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccaccccaggggttgccgaggcctcaggacttgcatgggccccaaggattgcaaaggcat
cctggacctcatggccctttgggacctcaaggaccaccaggaccacagggtaattctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacaaggtcacataggcccccaa
ggcccacctggtccccagggtcacatgggccctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcatcctcatgggatacaaggc
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagagaatcagggtcctgctccccaaggg
atgatgatgggccacccgcctcaagagatgagaggacctcaccctccaagtggactactg
ggacacggccctcaggaaatgagaggcatgcaggggcctccaccccaaggatcaatgctg
ggccctccccaggaattgcgagggcctccaggctcacaaggtcagcaggggccgccccag
ggctctttgggacctccaccccagggtggcatgcaagggccccctggacctcagggacag
cagaacccggcaagagggccacatccatctcaagggccaatatcattccagcagcagaaa
acagctctgctaggtgatgggccccgggcccccttcaatcaggaaggacagaacgcaggc
cccccacccctgataccaggcctagggcagcagggagcacaaggtcgcatcccccctctt
aaccctggacaaggacctggccctaacaaaggtgactcacgtggccctccaaaccatcac
atgggcccaatgtccgagaggcggcatgagcagagcagtggccctgagcatggtccagag
aggggccctttccggggtggccaggactgcaggggtccccctgataggcgcggccctcac
cccgacttccctgacgacttcagcagaccagatgacttccaccctgacaagcgctttggc
caccgattgcgtgaatttgaggggcgaggaggacctttaccacaagaagagaagtggagg
cgtgggggccctgggcctccgtttcctcctgatcacagggaattcagcgagggggatggc
cggggagcagcccggggccctccaggggcatgggaaggccgcagacctggtgatgaacga
ttctcccgggatcctgaggacccacgtttccgagggcgcagagaagaaagcttcagaaga
ggagcacccccgagacatgagggccgtgctccccccagaggaagggatggttttcctggt
cctgaagactttggtccagaggagaattttgatgcttctgatgaagcagctcgaggaaga
gatctcagaggtcgaggtcggggtacgccacgaggaggaaggaagggtttacttcccact
cctgatgagttccctcgctttgaaggaggacggaaaccagactcctgggacggaaataga
gagccagggccgggccacgaacatttccgtgacgctccccgccctgatcatccccctcac
gatggtcattccccagctagcagagaacgttcctcttctctccaaggcatggacatggca
tccctgccaccccgaaagcgcccctggcatgatgggccagggacctctgagcacagagaa
atggaagccccaggggggccttctgaggatcgagggggcaaaggccgagggggcccagga
ccttcccagagagtgccaaaatctgggcgttccagctccttggatggagatcaccatgac
ggataccacagagatgaaccttttgggggccctccaggcagtggtacaccttctagaggg
ggccgcagtggcagtaactggggtagagggagtaacatgaactctgggccgccacggcga
ggagcttcaaggggtggtggaaggggtcggtag
DBGET
integrated database retrieval system
