Equus caballus (horse): 100067542
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Entry
100067542 CDS
T01058
Symbol
DDX60L
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60-like isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100067542 (DDX60L)
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100067542 (DDX60L)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100067542 (DDX60L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
CCDC22_CC
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
100067542
NCBI-ProteinID:
XP_014593268
Ensembl:
ENSECAG00000024062
VGNC:
49403
LinkDB
All DBs
Position
2:66982739..67075174
Genome browser
AA seq
1719 aa
AA seq
DB search
MTQAAATMGLEDHVIFFRKMAKLILSEMPKAKYSSLLNDFVESNFFVIDGDSLLVTCLCD
KSFKQGQDLHFFYLVECYLVDLMSNGGQFAIVFFKEAECAYFDFPELLSLRTTLILHLQH
NTNIDVLTEFSGCSSLDWKLFLEEHYPYFLVVSEEGLNDGQTSFFNFLIIQSWAMGVNVV
LSSGQECDILRFHAYIMQSTDRNKKFSKENETVIQSAYESLMQHLEERKILALASHFRRL
RWKVMMEEACQTISLLQQLWLEALDIRRVVCVTSCSLALRMYHRFLGNKENTASGRETIT
HQVSSNYLPLREAEDLCRLHCLCMAFQLHLPLSQRACSRVIISPWIENVCTFLKMKKWCD
YFILRNLNLFEGWNLNLNHLSDLCDEHLLKNIAFYYETENTQELHLNLGDSIKRDYTHLW
NFVSHLVKEFDVGKPFPLRTTARPFLGKKLLPIQDVSLGKIPKVGFIPMTSAIIDKFVGD
VMKDLPILKSDAPAVTSLLKQKERDELLHWHAHRPLSNDYDKTRCLFYENSRDLPVFNVK
KNQSYPQFYGKSLESVSSKVIVTQTIQPKEDSWGAKSEISQQDAKSEKVTRKKKSSLLKQ
DQKEQQQWNDLLFSVEKELKENLNSGIRKLEDFLKSCKSNSVKIQVEMVGLSACFKAWKE
HCRDEGRISKDLSIAVQMMKRIHSLLERYPEILEEDHKFIAKCLKYLGFNNLANSLDPTL
VTGDDEKRKKKNKYAIDIGPARFQLQYMGHYLIRDERNDPDPRVQDFIPDTWQREVLDVV
DNNESAVIVAPTSSGKTYASYYCMEKVLKESDEGVVVYVAPTKVLVGQVAATVQNRFIKK
LPPGSALCGTFTRDYHYNTLNCQVLITEPACFEVLLLDPHCQKWVKRLRYVIFDEVHCLG
GETGGKFWEHLLVMIRCPFLVLSATISNPKLLTEWLQSVKQYWRQEDKMMEEKFISEVKS
DQCLNFLKDNLHRDQSYEVRLVLYGERYNDLEKHICSVKDNDICFDHFHPCAALTTDHIE
KYGFPSDLTLSPQDSVQLYDTMVQVWETWPRAQELSPEEFVLFKNKIVIKKLDARKYEEN
LKAELTRWIKNGKVKKAKRVLKKLSPNLVSSSDDMVKMFPLLVEKLRQMDKLPAIFFCFK
SVDVEERAKSVCAFLENPERKSCSQTDQCHSYAHDINKKLTKAENKVKRLKKTFGKDKEE
SRKLKLKLTYGAEYVNILNNLKEFLKIPEECLYADVNALHTETLEVVFKRVQLTRKGAEL
KALAQRGIGYHHDFMYFKEREFVEILFAEGFITVVTATGTLALGIHMPCKSVVLAQDSVY
LDALNYRQMSGRAGRRGQDLLGNVYFFDIPLPKIKRLITSNVPELRGQFPLSISLVLRLM
LLASKGGDPEDAKAKVLSVLKHSLMSFKQPRAMEILKLYFLFSLQFLVKEGYLDEEGNPM
RFAGLVSHLHGQEPSNFVFVSFLMKGLFHNLCQPIKKGSQLFSPSVMEKLILVLANLFGR
KYIPAKFQDANFSFPQSEVILDELPEDFKAALQEYNLKVMEDFASFLLIASKLANMKNEY
RLPLSRTKFTGKECEDCQLVSHLMNCKEGRVAISPFVCLSGNTDGDLLRPETLNRVILRT
IGINGTQAPVLWSQKLDNRGRGMPLNAYVLNFYKHGSLTRLCQDNGMPMGQILKLLKDFA
LNIQTISDFLSELCKDEHDNVVLAFKQLSELFQEKLRQV
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcagcagcaacaatgggattagaagatcatgtaatatttttcaggaaaatg
gcaaagttaattttgagtgaaatgccaaaagccaaatattccagtttattaaatgatttt
gttgaatctaatttttttgtgattgatggcgattccttgcttgtcacatgcctatgtgat
aaatcgttcaagcagggacaggatctccacttcttctacctcgttgaatgttatcttgtg
gatcttatgagtaatggaggacaatttgccatagttttcttcaaggaagctgaatgtgca
tattttgattttcctgaacttctttcattgagaactactttaattctccatcttcaacac
aataccaacattgatgttctaacagagttttctggatgctcatcactagactggaaatta
ttcttggaagaacattatccatattttctggtagtttcagaggaaggcctgaatgatgga
caaacgtccttttttaacttcttaatcatacagtcttgggcaatgggagtcaatgttgtg
ctttcatcagggcaagaatgtgatattctcagatttcatgcatatattatgcaaagcaca
gacagaaacaaaaagttttctaaggagaatgaaacagtgattcaaagtgcgtatgaaagc
ctcatgcaacacttggaagaaaggaagattttagcgttagcatctcactttagacgttta
agatggaaagttatgatggaagaggcatgtcagactatatctctgcttcagcagctgtgg
ctagaagcattggacatcaggcgtgttgtctgtgttacttcatgttccttagccttgaga
atgtaccatcgttttttaggaaataaagagaacacagcctctggtcgggaaactatcact
catcaggtgagcagtaattacctaccgctgcgggaggcagaagatttgtgcagactgcat
tgtctctgcatggcttttcagctccacttacctctttctcagagagcttgttctcgagtc
atcatctctccttggattgagaacgtctgtaccttcttaaaaatgaaaaagtggtgtgac
tatttcattctaagaaatttaaacctttttgaaggttggaatcttaatttaaatcatctt
tctgacttgtgtgatgagcatttgttaaagaatattgccttttactatgaaactgaaaat
actcaagagctacatttgaatttgggagattccattaagagagattacacacatctgtgg
aattttgtgtcacacctggtaaaagaatttgatgttggaaagccttttcctctgagaaca
acagcaaggccttttcttggaaagaagctattaccaatccaagatgtctccctgggaaag
atacctaaagtgggttttatcccaatgacatctgctataattgataaatttgtcggagat
gtgatgaaggatttgcctattctaaagagtgatgctccagctgttacttcactgcttaaa
caaaaggaacgtgatgaacttttgcactggcatgctcacagaccccttagtaatgactac
gacaagaccaggtgtcttttttatgaaaattctagagacctacctgtttttaatgtgaaa
aagaatcagagttatccgcagttttatgggaaatcattagaatcagtctcttcaaaagtc
attgtaactcaaactatccagccaaaagaggactcctggggagccaagagtgaaatatca
cagcaggatgctaaatctgaaaaagttactagaaagaagaaaagttcacttctcaaacaa
gatcagaaagaacaacaacaatggaatgatctgttattttctgttgaaaaagagttgaaa
gagaatttaaactctggaataaggaaactggaagattttttaaaatcatgtaaaagtaac
tcagtgaaaattcaggttgaaatggtagggttaagtgcctgctttaaagcatggaaagaa
cattgccgggatgaaggcagaatttcaaaagatttaagtatagctgttcaaatgatgaaa
agaatccattcgcttctggagagatacccagaaattttggaagaggatcataaatttata
gccaaatgccttaaatatttaggttttaataatttggcaaactctttagatccaaccctg
gtaacaggagatgatgagaaaaggaagaaaaagaataaatatgcaattgacattggacct
gctaggtttcaactacaatacatgggccattatttgatacgagatgagagaaatgatcca
gatcccagggtccaagatttcattcctgacacatggcagcgagaggtccttgatgttgtg
gataataatgagtcagcagtgattgttgccccaacatcctcaggcaaaacctatgcttcc
tactactgcatggagaaggtgctgaaggagagtgatgaaggggtggtggtgtatgttgca
ccaacaaaggtccttgtcggtcaagtggcagcaaccgttcagaatcgttttatcaaaaag
ttaccgcctggcagtgctctatgtggcactttcacgagagattaccattataatacactc
aactgtcaggtacttatcaccgagcctgcatgctttgaagttctgctgcttgatcctcat
tgccaaaaatgggtgaaaaggctcagatatgttatatttgatgaggtccactgtcttggt
ggagaaactggaggaaaattttgggagcatcttcttgtcatgattcgatgtccctttttg
gttctttcggctaccataagtaaccctaagcttcttactgagtggctgcaatcagtaaaa
cagtactggagacaggaagacaagatgatggaagaaaagtttatttctgaagtaaagtct
gaccagtgtctcaactttctcaaagacaacttgcatagagatcaatcatatgaagttaga
ctcgtgctctatggagagagatacaatgatttagaaaagcatatctgttcagtaaaagac
aatgacatttgttttgatcattttcacccatgtgcagcattaacaacggatcatatcgaa
aagtatggcttcccttctgatcttacgctttcccctcaagatagtgtccaactttatgat
accatggttcaagtctgggaaacttggcccagggctcaggaattgagtccagaggaattt
gttctttttaagaataaaatagtcattaaaaaattggatgctagaaaatacgaagaaaac
ttaaaggcagaactaacacgttggattaaaaatggcaaagtaaagaaggccaaaagagta
ctgaagaagcttagccctaatttggtgtcaagttcagacgatatggtaaaaatgtttccc
cttcttgttgaaaagttaagacaaatggataagttgcctgcgatatttttttgttttaag
agtgttgatgtggaagaaagagctaaaagcgtgtgcgcttttttggagaacccagagaga
aaaagctgtagccagactgaccaatgtcatagctatgcccatgatataaataaaaaactt
accaaagctgaaaataaagtgaaaagactaaagaaaacctttggaaaagacaaggaagag
tccaggaagttgaaactaaaactaacatatggagctgaatatgttaatatcctcaacaat
ttgaaggagtttctgaaaatccctgaggagtgcttgtatgctgatgtcaatgcgctgcac
actgagactttggaggtggtgtttaaacgagtgcaattaacgagaaaaggcgcagaactg
aaggctttagcacaaaggggtattggctatcatcacgatttcatgtattttaaggaaaga
gagtttgttgagatactttttgcggaagggtttatcacggtagtgacagctactggaaca
cttgccctaggaatccacatgccatgtaaatctgttgtgcttgcacaagactcagtctac
ctggatgctttaaattatagacagatgtctggacgtgctggaagacgaggtcaagacctg
ctgggaaatgtatatttctttgatattccattgcccaaaataaaaagactcatcacatcc
aatgttcctgaactgagaggacagttccctctcagcataagcctggtcctgagactcatg
ctgctggcttccaagggaggtgacccagaggatgccaaggccaaggtgctgtcggtgtta
aagcattcattgatgtcctttaagcagcccagagccatggagatactgaaactttacttc
ttgttttctttgcagttcctagtcaaagagggctatttagatgaagaaggcaatccaatg
agatttgcaggacttgtatcacatttgcatggtcaagaaccttcaaattttgtttttgtc
agttttcttatgaaaggccttttccataatctctgtcagccaatcaagaaaggctcacag
ctattttctccgagtgtgatggaaaaactcatattagtattggcaaatttgtttggaaga
aaatatattccagcaaaattccaagatgctaatttcagttttcctcaatcagaggtgatc
cttgatgaactcccggaggattttaaggctgctttacaggagtataacttgaaagtgatg
gaagactttgcctctttcctactgattgcttccaagttggcaaacatgaagaatgaatat
cgacttcctttgtcaagaaccaaattcacaggtaaagaatgtgaagactgtcaacttgtg
tctcatttaatgaactgcaaggaaggaagagtagccatttcaccatttgtttgtctctcg
ggaaacacagatggtgatttgcttcgacctgagactctcaaccgtgtcattttgcggaca
attggtatcaatggcactcaggctcctgtgctatggtcacagaaattagataaccgagga
agaggaatgccacttaatgcttacgtgcttaatttctataaacatggttccttgacgaga
ttatgccaagacaacgggatgcctatgggacagattctaaagcttttaaaagattttgca
ctcaacattcagactatcagtgatttcttgagtgaactgtgtaaagatgagcatgacaat
gtggtcttggcatttaaacaactgagtgaactcttccaggaaaaacttcgacaagtctaa
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integrated database retrieval system
