Equus caballus (horse): 100067608
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Entry
100067608 CDS
T01058
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100067608
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100067608
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100067608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100067608
NCBI-ProteinID:
XP_014593226
LinkDB
All DBs
Position
2:67218506..67326750
Genome browser
AA seq
1807 aa
AA seq
DB search
MASASTTSNENSSSGNNESESDIESDSCDDSETTESLSSFDQSEEEDQLSSEDVIEEPAS
RQLPSEFEINEEKPSKVEPTDVSDCDLERSELKECEGILRKLSLLIWKTLSKSNMVSLLK
DFVESEFFLIDGDSLFITCVSNVNFKKGQTLHFFYIVEQFLHDFIQKEAKFVIVFFKDAE
NMYFSYPELQALRMILIQHLEHNTDVTIHTEFSNCLSPEWEIFLQQCYPYFLIVSERGIT
PCQTDFLNIFIIHALQKKISIVQPSGIESDVLRIYGYCASSCYSHRLFFEMHEKQLRHAL
HAYVIEYFQKSQGTGIFLYGHLKLNLGDMQKEIHQTLSLLQNLWPEGADIRSVVCSISCS
VTLKLYKKMLHEAEDCENLNICTENHNTQDLKKPPTLKEAADLCRMLCLTVVLLQRLPLF
QRAKSRIITHVWDSTLSPFLRMLKKCEFFILKQLEARNNWNVNFTGLPDLTDNILWKNIA
YYYEIEYSRGLNLELGDTLKQECLKLWNTVLLFSGDGDLGGLIPLRTTSRPFLTQKETSP
GGSNQEIHKSGLIPLKAEIIEEYAGDIMSELPFLSSDDPAVLSLSKKREFDELTHWHSAR
PLSDDFERTRCSSDAKSKDAKGKWEIQKLHHFYHVFGKSLIGSNRSVRIVQERALPPPEN
SSGKKKRKHQKTNAEKFIEENQKRQLAKLEKREEERWNNLSLYIEKEIKESPKSGIKRLE
DFLQICPVKSVRFTAEMVGMDACFKLWMEYCLKTEAESRDISIIINLMKRIHIIHEKYSE
LLQNTHRQKLAKYLRYIGFDNLAHSLYPQVAQSRTEKDISKYSVHMGAARFQLTYMGPYL
FREERSDPDPRVQHFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASYYCMEKILREGN
EGVVVYVAPTKALVNQVVGTVCNLFTKALPKGLVVCGTFTRDYRHDALNCQILVTVPQCL
EILLLSPHNQKWVKRMRYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLALSATISNPEHL
TEWLVLIKRYWQHVESTMENSGSSQNALKASKKQQRKRIEKSSHIVRLVWYKERYNDLEK
YVCSLKDNDFLIEHYHPCAALTVNHIEKYGIPLDLGFSPRESILLYDAMVHVWPEWPRMQ
ELEPEEFSCFKNKVVIMRADAKKYEEELKKEVIHWTQLDRTKVNQLLEYLKPQTFDSSET
EKRRMFPCFVEKLKEMDRLPAIFFSYNIHSVELSASRLLTNLINKRNTHNNPISEREKKN
LNKKLWKAIRSQKRNYAAFLNSDSNARIQRIILWEAEIKEIKKNIKKHNEVSPECTYTDH
TAVDNQTLMKILRRLRGTRQCYKLHSLLRRGIGYHHGSMEYKERQVVEMLFRLKHIKVVT
ATSTLALGINMPCKSVVFTEDSVFLDALNFRQMSGRAGRRGEDLIGNVFFYDIPLPKIQR
LLKSNVPKLKGQFPLSISLVLRLMLLVAKANDKEDAKAKALSVLQHSLMSFKRPKIECML
KFYFIYSLQFLVTEGYLNEKCVPIGYTGLVSHLHYHEPANFVLVSLLVKGLFHKLCIPIS
IDGRKTFSEDVMETLVVVLANLFGRRYLPPCVENFKKKFSPSIVTLDDLPKDFAAVVEEH
NNRMQGNFGSFLLTISKLADMRKEYQLPLSEIDFSGKECEDSELVSHLMPGAESRTAVSP
FACLSNITDQDLFDINVVNDAMLQTINLNVKNIPLLCLNKYDKTGRKCPLNAYALNFYKH
GSLLALTLGNWLNMGDAFNLIRDFALVIQSVRISLSELCDDEDDNVVLAFKQLSEAFKTK
LWKKRRY
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcatctactacgtcaaatgaaaactcaagctcaggtaacaatgaaagtgaa
agcgatattgaaagtgatagctgtgatgacagtgagaccacagagagtttgtcctcattt
gatcaatctgaggaagaagatcaactaagctcagaagacgtaatagaagaaccagcttct
aggcaattaccatctgagtttgaaatcaatgaagagaagccttcaaaagttgaacctaca
gatgttagcgactgtgatttagaaagatcagaattaaaggaatgtgagggaattctgagg
aagctctcattgttgatttggaaaactctgtcaaaatcgaacatggtaagcttactgaaa
gactttgttgagtctgaattctttttgattgatggagattccttattcatcacttgtgtt
tccaatgtgaacttcaagaaaggacaaactcttcacttcttctatattgtggaacaattt
ctgcatgatttcattcaaaaggaagccaagtttgtaatagttttttttaaggatgcagaa
aatatgtattttagttaccctgaacttcaggcccttcgtatgatattgattcaacattta
gaacacaatactgacgtcactattcatacagaattttccaattgtctgtcaccagaatgg
gagatatttcttcaacaatgttacccatatttcctaattgtctcagaaaggggaataaca
ccttgtcaaacagactttttaaacatttttatcattcatgctcttcagaagaaaatcagt
attgtgcagccttcgggaatagagtcagatgtcctaagaatttacgggtactgtgcctca
agttgctattcacacaggctgttttttgaaatgcatgaaaaacagctgcggcacgcctta
catgcctacgtaatagagtatttccaaaagtcacaaggaacaggaatatttctttatggt
catttgaaattaaacttgggagacatgcagaaagagatacatcaaaccttgtccttgctt
cagaatctgtggccagaaggagctgatatcagaagtgttgtctgctccatttcatgctct
gtgacactaaaactctacaaaaaaatgttacatgaggcagaagactgtgaaaacctaaac
atatgcacagagaatcataacacacaggacttgaagaaaccaccaacactaaaggaagca
gcagatctttgcagaatgctctgccttactgtggttctccttcaacgtttacctctgttt
caaagagccaagagtagaatcattactcatgtttgggacagcacactttcaccgtttcta
agaatgctaaagaaatgtgaatttttcatcctaaaacaattagaggctagaaataattgg
aatgtgaatttcactggcctgcctgacttaactgataatattttgtggaaaaatattgct
tattattatgaaattgaatacagtagagggctaaatttggaattgggtgacactttaaag
caagaatgtctgaagctgtggaacacagtcttactattctcaggggatggtgatctggga
ggactcatacccctgaggacaacgtccagaccatttctcacacagaaggaaacatcccct
ggaggatcaaatcaagaaattcataaatcaggactcattcctctgaaagctgagattatt
gaagaatatgctggagatattatgtcagaactaccttttctaagcagtgatgacccagct
gttctctctctttctaaaaagagagaatttgatgaactcacacactggcattctgctaga
cctctcagcgatgattttgaaaggactaggtgcagcagtgatgctaaatccaaagatgcc
aaaggaaaatgggaaatacagaaattacatcatttttatcatgtctttggaaaatctttg
ataggaagtaacagatcagtaaggattgtacaagaaagagctctgccacctccagaaaat
tcttctgggaaaaagaaaagaaaacaccagaagacaaatgcagaaaaatttattgaagaa
aatcaaaagagacaactagctaaactagagaagagagaggaagaacgatggaataacttg
tccctatatattgaaaaggaaattaaagaaagtcctaaatctggaataaaaagactagaa
gattttctacaaatatgtcctgttaaatctgtaagatttactgcagaaatggtaggaatg
gatgcctgtttcaaattatggatggaatactgtttaaaaacagaagcagaatccagagat
ataagcataataattaacttgatgaaaaggattcacataatccatgaaaaatattcagaa
ctattacaaaatacacatcgacaaaaattagccaaatatctaagatatattggatttgac
aacttggcacactcattatatcctcaggtggcacaatcacgtactgagaaggatatttct
aaatattcagttcacatgggagcagctcggtttcagttaacgtatatgggaccttactta
tttcgagaagaaagaagtgatccagatcccagggtgcaacattttataccagacacatgg
cagagagaacttcttgatgttgtagataataatgaatctgctgtgattgttgctccgacc
tcatcagggaaaacctatgcatcttactactgcatggagaaaatcctgagagagggcaat
gaaggggtagttgtatatgttgctccaacaaaggctcttgttaatcaagtggtgggaact
gtctgcaatttatttaccaaagcactgccaaaaggattagtggtgtgtggaacttttaca
agagattaccgtcatgacgccttgaattgtcagatattggtgacagtgcctcagtgtttg
gaaatactcctgctatcacctcataatcaaaaatgggtgaaaagaatgagatatgtcata
tttgatgaggttcactgtcttgggggagaaattggagcagaagtttgggaacatctactt
gttatgattcggtgtccctttctggcactttctgctactatcagtaatcctgaacatctc
actgaatggttggtgttaattaaaagatactggcaacatgttgagagcacaatggaaaat
tctggttcatcacaaaatgccctgaaagcttcaaagaaacaacaaagaaaaagaatagaa
aagtcatcacacatagttagactggtatggtacaaagaacgatacaatgatctagaaaag
tatgtgtgttctctaaaagataacgactttctcattgaacactatcacccatgtgctgca
cttacagtcaatcatatagagaaatacggaatccctttagaccttggattttctcctcgg
gaaagcatactgctttatgatgctatggtacatgtttggccagaatggccaagaatgcag
gagttagaacctgaagaattcagctgcttcaaaaataaggtagtcatcatgagggcagat
gccaagaaatatgaagaggaactgaaaaaggaagtgattcattggactcagctggaccga
accaaggtaaatcagttactggagtaccttaagcctcaaacttttgacagttcagaaact
gaaaagcgaagaatgtttccttgttttgtggaaaaacttaaagaaatggataggcttcct
gcaatatttttttcatacaacattcactcagtggaattatcagcttcacgacttcttact
aatttgataaataagcgaaatactcataacaatccaatttctgaaagagagaagaaaaat
ttgaacaagaaattatggaaagcaataagatctcaaaagagaaactatgctgctttttta
aactcagattcaaatgctagaattcaaagaattattttatgggaggctgaaataaaggaa
ataaagaaaaacattaagaagcataatgaagtttctcctgagtgtacttatactgatcat
acagctgtggataatcagactttaatgaagatcttacgcaggctgagaggaacaagacaa
tgctacaaactgcacagtctgttacggcggggcattggatatcatcatggttcaatggag
tataaagaaagacaagttgtagagatgcttttcagactgaagcatatcaaggtggtaaca
gctacctcaactcttgctttaggaattaatatgccatgcaaatctgttgtttttacggaa
gattctgtgtttttggatgccttgaactttcggcagatgtcgggtcgtgcaggaagacgt
ggagaagatctcataggaaatgtgttcttctatgatattccgttacccaagatacaaagg
ctcttaaagtcgaatgtgcccaaactgaagggtcagtttcctctaagcatatccttggtt
ctcagacttatgctgttagttgccaaagcaaatgacaaagaggatgccaaagccaaggca
ttatcagttctccagcattcattgatgtccttcaagcgaccaaagattgagtgcatgtta
aaattttacttcatatattctttgcaattcttggtcacagagggatacctgaatgaaaaa
tgtgttcccattggatatactggacttgtgtcccatttgcactaccatgaacctgcaaat
ttcgttttagtaagcttgctggtaaaaggtttatttcacaagttgtgtattccaatcagc
atagacggccgaaagacattttctgaagatgtgatggaaaccttagtggtggtgttagca
aatctttttggaagacgttatcttcctccttgtgtggaaaactttaaaaagaaattttct
ccctcaatagtaactctagatgatcttcccaaggactttgctgcagtagtagaggagcac
aataacagaatgcaagggaattttggttccttcctcctaacaatttctaagttggctgac
atgagaaaagaatatcaactacctctctcagaaattgacttttcaggtaaagaatgtgaa
gactctgaactggtctctcatttgatgcctggggctgaaagcagaactgctgtctcccca
tttgcttgcctgtccaacataacggatcaagatttatttgacattaatgtggtaaatgat
gctatgttacaaacaattaacttgaatgtaaaaaatattcctttgctttgcttgaataaa
tatgataagactggaaggaagtgtccattgaatgcttatgcattgaacttctacaaacat
ggctccctgttagcgctgactttgggtaattggctaaatatgggagatgcttttaattta
atcagagattttgctcttgttattcagtctgtcaggatttcactaagtgaattatgtgat
gatgaagatgacaatgttgtgctggcgtttaaacagctaagtgaggcattcaagacaaaa
ctttggaaaaaaagaagatattga
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integrated database retrieval system
