Equus caballus (horse): 100068381
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Entry
100068381 CDS
T01058
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100068381 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100068381 (COL23A1)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100068381 (COL23A1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100068381
NCBI-ProteinID:
XP_023472832
Ensembl:
ENSECAG00000008336
VGNC:
16734
UniProt:
A0A5F5PKX2
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All DBs
Position
14:3266869..3582764
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AA seq
688 aa
AA seq
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MGTRVGESQRCVRGRAYSLAPPAGEGGSARGARYPPGARGGLRGATLPSRPRPLGARGWP
GRSSPGWVPAPFLAGSICIEETAQSGRCGGAGGGEGGVGRDPLLLGGQAPCLAELVPRAV
PPGPRSLSWSPALHRPLGEPTRDQRAMSPGERAGGDARKDGPAGGGGGCGRPATAAGAWA
VSALCLLLSVGSAAACLLLGAQAAALQGRVAALEEEREQLRRAGPPSALVAWAEPHLERL
LREKLEGLVKLRTVREAPAECTCPPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGK
PGLPGPKGEKGAPGDFGPRGDQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGTAGPAGP
KGEAGQDGEMGPKGPPGPKGEPGVPGKKGDDGTPSQPGLPGPPGPKGEPGSVGPRGENGV
DGAPGPKGEPGQRGADGAAGPRGPAGLKGEQGDTVVIDYDGRILDALKGPPGPQGPPGPP
GTPGAKGELGLPGAPGIDGEKGPKGPKGDPGEAGPTGPKGEAGEMGLSGLPGADGPKGEK
GEPAPDNLQESLAQIIVEPGPPGLPGPPGPMGLQGIQGPKGLDGAKGEKGTSGERGPSGL
PGPAGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERGEKGERGIPGRKGVKGQ
KGEPGPPGLDQPCPVGPDGLPVPGCWHK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcgggttggggagtcgcagaggtgcgtgcgcgggagagcgtacagcctggcg
cccccagcaggtgagggcggaagtgcgcgcggcgctcggtatccgccgggcgcgcgcggg
ggtcttcggggagccacgctaccttcccgcccccgccccctcggcgcgcggggctggccg
ggccgctcctcccctgggtgggtcccggctccttttctggcagggtctatttgcatagag
gaaactgcccaaagtggccgctgtggaggagctggcggcggagaagggggcgtgggccgc
gatccgctgctgctcggaggccaagccccgtgcctggccgaactcgtgcctcgggctgtc
ccgcctggtccccgctcgctcagctggtccccagctctgcaccgccccctcggagagccc
acgcgcgaccagcgcgccatgagcccgggcgagcgcgccggcggcgacgcgcgaaaggac
ggcccggcgggcggcggcggcggctgcgggcgccccgcgacggcggccggggcctgggcg
gtgagcgcgctgtgcctgctgctctccgtcggctcggcggccgcctgcctgctgctgggc
gcccaggcggccgcgctgcagggccgggtggcggcgctcgaggaggagcgggagcagctg
cggcgcgcggggccgccgagcgccctggtcgcctgggccgagccgcacctggagcgcctg
ctgcgcgagaagctggagggactggtcaagctgcggacggttcgggaagcgccagccgag
tgcacctgccccccaggcccccctggacggcgtggcaagcctggaagaagaggcgatcct
ggtcctcctgggcaatcaggacgagatggctacccggggccactgggtctggatggcaag
cccggacttccaggccccaagggggaaaagggtgcaccaggagactttggcccccgggga
gaccaagggcaagatggagctgctgggcctccggggccccctggaccccctggggcccgg
ggccctcctggcgacactgggaaagatggccccaggggaacagcaggcccagcgggtccc
aaaggagaggctggacaagatggcgagatgggcccaaagggacccccgggaccaaagggt
gagcccggcgttcctggaaagaagggggatgacgggacaccaagccagccagggctccct
ggacccccagggcccaagggcgagcccgggagcgtggggcctcggggagagaacggcgtg
gacggcgccccagggccaaagggggagcctggccagcgaggcgccgacggagctgcaggg
ccgcggggtcccgcgggcctgaagggcgagcaaggagacacggtggtgatcgactatgac
ggcaggatcttggatgcccttaagggtcctcctgggccacaggggcccccagggccacca
gggacccctggagccaagggtgaactcggactgcccggtgccccgggaatcgacggagag
aagggtcccaaaggaccgaaaggagacccaggagaggctgggccgaccggacccaaaggg
gaagcaggagagatgggcctgtcgggcctcccgggcgccgatggccccaagggggagaag
ggagagccagcacctgacaacctacaggagagcctggcccagatcatagtggaaccaggg
ccccccggcctccctggtcccccaggacccatgggccttcagggaatccagggtcccaag
ggcttggacggagcaaagggggagaagggcacgtcaggggagagaggccccagcgggctg
cctgggccagctggcccgccaggccttattgggctgccaggaaccaaaggagagaagggc
agacccggggagccaggactagatggtttccctggaccccgaggagagaaaggcgaccgg
agcgagcgtggagagaagggggagcgaggcatccctggccgcaagggagtgaagggccag
aagggcgagccgggaccgccgggcctggaccagccctgtcctgtgggccccgatgggctg
cccgtgcctggctgctggcataagtga
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