Equus caballus (horse): 100068576
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Entry
100068576 CDS
T01058
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100068576
03015 mRNA surveillance pathway
100068576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100068576
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100068576
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100068576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100068576
NCBI-ProteinID:
XP_001498450
Ensembl:
ENSECAG00000007906
LinkDB
All DBs
Position
3:complement(23962676..23987113)
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AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMGNLQIKEEKVKADTNGVIKTSATAEKTDDEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVQPAERYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCAKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcttgggccctggcagtggacgagcaggaagcggctgtcaagtcgatg
ggtaatttgcagatcaaagaagagaaagtgaaagcagataccaatggtgttatcaaaacc
agtgctactgcagagaaaacagatgacgaagagaaagaggacagagctgcccagtcctta
ctcaacaagctgatcagaagcaaccttgtcgataacacaaaccaggtggaagtgctccaa
cgggatccaaactcccccctctactcagtgaagtcctttgaggagcttcggctgaaacca
cagcttctccagggagtctatgccatgggcttcaaccgtccatccaagatacaggagaat
gcgttacccatgatgcttgctgagcccccacagaacctcattgcccagtctcagtctggt
actggtaaaacagctgccttcgtcctggccatgctcagccgagtgcagccagcagagagg
tacccccagtgtctgtgcctctccccaacgtatgagctggcgcttcagacaggaaaagtg
attgagcagatgggcaaatttcatccggaactaaagcttgcttatgctgttcgaggcaat
aaattggaaagaggtcagaagatcagtgagcacattgtcattggcacccctgggaccgtt
ctggactggtgcgccaagctcaagttcattgaccccaagaagatcaaagtgttcgttctg
gatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatccag
aggatgctgcccagaaactgccagatgctgcttttctctgccacctttgaagactctgtg
tggaaatttgcccagaaagtggtcccagatcctaacattatcaaactgaagcgtgaggag
gagacgctggacaccatcaagcagtattacgtcctttgcaataacagagatgagaaattc
caggccttgtgtaacctctacggggccatcaccattgctcaagccatgatcttctgccat
acccgcaaaacagctagttggctggcagcagagctctcaaaagaaggccaccaggtggcc
ctgctgagtggtgaaatgatggtggagcagagggctgcagtgattgagcgcttccgagag
ggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgtggtattgatgttgaacag
gtgtctgtcgtcatcaattttgaccttcctgtggacaaggacgggaacccggacaacgag
acctacctgcaccggattgggcgcactggccgctttggcaagaggggcctggcggtgaac
atggtcgacagcaagcacagcatgaacatcctgaacaggatccaggagcattttaataag
aaaatagaaagactggacacagatgatttggatgaaattgagaaaatagccaactga
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