Equus caballus (horse): 100069671 Help Entry 100069671         CDS       T01058                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism ecb  Equus caballus (horse) Pathway ecb04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:ecb00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     100069671 (COL17A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen DUF2868 Motif Other DBs NCBI-GeneID:  100069671 NCBI-ProteinID:  XP_014588587 Ensembl:  ENSECAG00000007909 VGNC:  16727 LinkDB All DBs Position 1:26457304..26508580 Genome browser AA seq 1492 aa AA seqDB search MDVTRTNKRDGTEVSERIITETVTTRLTSLPPKGGTSNGYAKTGSLGGGSRLEKQSLMHG SSGYINSGGSTRGHASTSSFRRAHSPASTLPNSPGSTFERKTHVSRHGTYEGSSSGNSSP EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS SNTLPIPKKGTVETKMVTASSQSVSGTYDTTILDANLPSHVWSSTLPAGSSMGTYHNNVT AQSSSLLNTNAYSAGSVFGVPNNMASCSATLHPGLSAGSSVFGMQNNLAPSSSTLSHGMT TTSTAYGVKKNMPQSPPVVSTGMSTSAASTASVQNDELLHKDCKFLIREKDNVPATKKEM ELLIMTKDSGKVFTASPASMSSTSFSEDTLKKEKQAAYTADTYLISDTNGDVKTVSTKAK AASADFHGYDHRSGGGGGGGVGSGGGGPWGAVPAWCPCGSSCSWWKWLLGLLLTWLLLLG LLFGLIALAEEVRKLKARVDELEKTRNMRVMEEKVEAQVQGDKPEVGTDMGKTGLYDDGQ KEVLWEFVRNKLMMEQENGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIPGPLGHPGPEGP KGQKGSVGEPGMEGPMGQRGREGPAGPRGEPGPPGFGEKGDRGAAGVPGIQGPPGVPGSV GPKGSSGSPGPQGPPGAIGLQGLRGEAGLPGVKGDKGPMGPPGPKGDQGEKGPRGLTGEP GLRGLPGSVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGIRGPPGPSGDPGKPGLTGPQ GPQGLPGTAGRPGPKGEPGAPGRIVTSEGSSTITVPGPPGPPGAMGPPGPPGVPGPIGPA GLPGQQGPRGEPGLAGESFLSSTQSLSEVLSTQGLDLRGPPGPPGPPGPPGASIPGPPGP RGPAGEGLPGPPGPPGSFLTGSETFFSGPPGPPGPPGPKGDQGPPGPRGHQDSGSLGLNL QGPPGPPGPQGPKGDKGDPGVPGAVGVPGGYSQGGSPSSTVFLPGPPGPPGPPGPPGSLS SSGLEIQQYISDYMQSDIIRSYFSGVQGPPGPPGPPGPVTTIRGETFDYSELASLVVSYL QTSGTSIGLSLASVSSEDILAMLQRDEVRQYLRQYLMGPQGPPGPPGAGGDWSLQSLDYA ELSSRILSYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLQGSEFRGIIGPPGPPGPPGI PGNAWSSISVEDLSSYLHTAGLSSIPGPPGPPGPPGPRGPPGVSGALATYAAENTDSFRS ELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLVSMDGPYSRGSSSSSGSSYSSSMGIGG ASEGSLGEGGAFGLDMGLGRGYGAAAGNGMYGGNGGYFGAGFAGGLDYNELAVRVSESLQ RQGLLQGMAYTVQGPPGRPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGAIPGPPGQKGE VGIPGPKGDRGPAGPPGRPGSPGPRGHKGEKGDRGDQVYAGRRRRRSVATKP NT seq 4479 nt NT seq  +upstreamnt  +downstreamnt atggatgtcaccaggacaaacaaacgagacggcactgaagtctctgaaagaattatcaca gaaacagtaactacaagacttacatccttaccaccaaaagggggaaccagcaatggctat gccaaaacaggttctctcggtggagggagccggctagagaaacagagcctgatgcacggc agcagcggctacataaactcaggtggaagcacacgtggccatgcctccacctccagtttc aggagggctcattcacctgcctccacgctgcccaactcaccaggctcaacttttgaaaga aaaactcacgtcagccgccatggaacctacgaagggagctccagtggcaactcttccccg gagtaccctcgcaaggaatttgcatcttcttcaaccagaggaaggagccaaacacgagag agcgagatccgggttcgactgcagagtgcatccccgtctactcgatggacggaattggat gatgttaagcgtttgctcaaggggagccgatcagcaagtgtgagcccgacccggaactcc tccaacaccctccccatccccaagaaaggcaccgtggagaccaaaatggtgacagcaagc tcccagtcagtatccggcacctatgacacaaccatcctggatgccaacctcccctcccac gtgtggtcctccaccttgccagcggggtcctccatggggacctatcacaacaacgtgacg gcccagagctcgtccctcctcaacaccaacgcctattctgcaggatcggtcttcggagtt cccaataacatggcgtcctgctctgccaccctgcaccctggactcagtgccggctcctca gtgtttggcatgcagaacaatctggcccccagctcgtccaccctgtcccatggcatgacc accacctccacagcgtacggtgtgaagaagaacatgccccagagtccccccgtcgtgagc acgggcatgtccacctctgccgccagcactgcaagtgtccagaatgatgagctcttgcac aaggactgtaaattcctgatccgggaaaaagacaacgtgcctgctaccaagaaggagatg gagctgctgatcatgaccaaggacagtgggaaggtcttcacagcctcccccgccagcatg tcttcaacttctttttcagaggataccctaaaaaaggaaaagcaagcagcctacactgct gacacctacctaatctcagacactaatggagacgtgaagactgtgtccacaaaggccaag gccgcctctgcagatttccatggctatgaccaccgtagcggtggtggtggcggtggtggt gttggcagcggtggcgggggcccgtggggggcagtgccagcctggtgcccctgcggctcc agctgcagctggtggaaatggctactgggcctgctgctcacctggctgctgctcctgggg ctgctcttcggcctcattgctctagcggaggaggtgaggaagctgaaagcgcgtgtggac gagttggagaaaaccaggaacatgcgggttatggaagagaaggtcgaggctcaggtgcag ggtgacaagcctgaggtgggaacagacatggggaaaactgggctttacgacgacggccag aaggaggtgctctgggaattcgtgaggaacaagctgatgatggaacaagaaaacggaaat ctccgaggaagcccgggccctaaaggtgacatgggaagtcaaggccctaaaggagaccga ggactccctgggactccaggtatccctgggcccttgggccacccaggtccagaaggacca aagggacaaaaaggcagcgtgggagagcccggcatggagggacccatgggccagagaggg cgagaaggccccgcgggaccccgcggtgaaccagggcctcctgggtttggagagaaaggg gacagaggggctgctggtgtgccgggcattcagggcccacctggtgtcccaggttctgtg ggtcccaaaggttccagcggttctcccggcccacagggtcccccaggcgctataggtctc caagggctccgaggcgaagcgggactccctggtgtcaaaggtgacaaagggcctatggga ccaccaggacccaaaggtgaccaaggtgaaaaaggaccccgaggtctcacaggcgagcct ggcttgagaggtttgcctggctctgtgggcgagcccggggctaaaggagctatgggaccc gctggcccagacggacagcaaggcccaagaggcgaacaaggtcttacagggatgcctgga atccggggcccaccaggaccttctggagacccaggaaagccaggtctcacaggaccccaa ggacctcagggacttcctggtaccgccggccgacccgggcctaaaggtgaaccaggagct ccaggcaggattgtgacttcagaggggtcatcgactatcaccgtcccaggccccccggga cctcctggagccatgggacccccaggacctccaggtgtgccaggccccatcggcccagct ggtctcccaggacagcaaggcccacgaggggagccagggcttgctggtgaatcgttcctg agcagcactcagtccctctccgaggtcctctccacccaaggtcttgatttacgaggtccc ccaggcccacctggcccacctgggccaccaggagcttccattccaggcccaccaggaccc cgaggcccagcaggggaaggcttgccaggcccaccaggcccaccaggatctttcctgacc ggctcagagaccttcttctctggccctccaggcccacctggccccccaggccccaaggga gaccaaggccccccaggcccccgaggacaccaagattccggttctctcggactcaacctg cagggaccgccaggcccacccggccctcagggacccaaaggtgacaaaggtgatcctgga gtcccaggtgctgttggtgttcctggtggttactctcaagggggatcaccatccagcacc gtgttcctgccaggcccgccaggccccccggggccccctgggcctccaggctctctcagc agctctggcctggagattcagcagtacatctctgactacatgcagagtgacatcattagg tcttatttctctggagttcagggtcccccaggcccacctggtcccccagggcctgtcacc accatcaggggtgagacttttgactactcggagctggcaagcctcgtcgtgagctactta cagacttcggggaccagcatcggcctgtcgttggcctccgtctcttctgaggacatcctg gccatgctgcagcgggatgaggtgcgtcagtacctgcgtcagtatctgatgggccctcag ggtcccccggggccaccaggagccggtggcgattggtccctccagtctttggactacgca gagctgagcagtcgcattctcagctacatgtcgagttctggaatcagcattgggcttcct ggccccccagggccccctggcttgccgggaacatcctatgaggagctcctctccttgctc caagggtctgagttcagaggcatcattgggcccccaggcccccctgggcccccagggatc ccaggcaacgcgtggtccagcatcagcgtggaggacctctcatcttacttgcatacggcc ggcttgtcatccatcccaggccctccaggccctcctggtcccccaggccctcgagggcct ccgggtgtctcaggagctctggcgacatatgcagctgaaaacaccgacagcttccggagc gaactgatcagctacctcacgagtcctgatgtgcgcagcttcatcgttggtcccccaggc cctcccgggccccagggaccacctggggacagccgcctagtgtccatggatggcccctac agtcggggtagcagctcctcctcaggcagctcctacagctcttcaatgggcataggagga gccagcgaaggctctctgggcgaagggggagcctttggcctggacatgggcctgggccga ggctatggggcagcagcaggaaatggcatgtatggtggcaatggcggatattttggggct ggctttgctggaggtctggattacaacgagctggctgttcgggtgtccgagagcttgcag cgtcagggcctgctacaaggaatggcctacactgtccagggcccaccaggccggcctgga ccccaggggccccccggcatcagcaaggtcttctctgcctacagcaacgtgaccgaggac ctcatggacttcttccgaacttatggagccattccaggaccccctgggcagaagggagag gtgggcatcccaggacccaaaggtgacaggggtcctgctggaccaccaggtcggcctggg tcacccggcccccgagggcacaagggagaaaaaggagacagaggcgaccaggtctatgct gggaggaggagaaggagaagtgtcgccaccaagccatga

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