Equus caballus (horse): 100069673
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Entry
100069673 CDS
T01058
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ecb
Equus caballus (horse)
Pathway
ecb05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100069673 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100069673 (CIC)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100069673 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100069673
NCBI-ProteinID:
XP_023507137
VGNC:
51016
LinkDB
All DBs
Position
10:complement(13667264..13694084)
Genome browser
AA seq
2525 aa
AA seq
DB search
MKPMRKACTGLPGPGSGGKSPPATRAKALRRRGAGEGNKPEEEDDEAQQQQQQQQQQQPS
PEEAEEGEEEEAERGPGAEGLPPELHPDDPAPGPAEDPKVEGEAGRWEPSLSRKTATFKS
RAPKKKYVEEHAGGSGSGGAAGAPEERARTPEEAGALGVPPRPPTSTRSSSTDTASEHSA
DLEDEPAEACGPGPWPPGGTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQ
FPGDRALTFYEGAPGGGVDVVLDATPPPGALMVGTAVCTCVEPGMAAYREGVVVEVTTKP
AAYKVRLSPGPSSQLGPPATLPQPPQPPHRESEEAVWVARSSLRLLRPPWEPEALPRKPS
KGPEEEQAEPGATLPPCPAALDPKQPEDAEVSKISFGGNLGACEEGEEKHPPALGTPALL
PLPPPQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPL
TAAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEG
LADSGPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEF
DECEAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQ
RTAVRSRHLSASTPKGGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRR
KTELLPHPGTLGAPGTGGGGAAADFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFS
RSRQPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTAGEA
RAAGPGRGCRETSVPTGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQ
PVAFHPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLA
PSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPES
PGPGPPHTLGVVEPGKGPPPTTEDEAPGAPGEPRLDSETESDHDDAFLSIMSPEIHLPLP
PGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQ
DNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTS
LGLAGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGAERLHTVG
GPGSARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPG
EGGALAASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSNTDIDL
KCKERVTDSESGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPSLDPEPPGPPDPPTAFG
KGYGPTPSSSSSSPASSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAGGPATPS
KAARFLSTDPVTFRRKRPESVGGLDPPGPSVIAAPPSGGGSVLQTLVLPPNKEEREGSGA
RMPSAPAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEVSPNDTA
GARTETVTGSRAPGGSPLGVSLVYSDKKSTAATSPAPHLVAGSLLGTVGKAPATVTNLLV
GTPGYGTPAPPAVQFIAQGAPGSGATASSGAGAGSGPNGPVPLGILQPGALGKAGGITQV
QYILPTLPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPG
IPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLV
SPSFSVPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLPGPASQPQKVLLPSSTRIT
YVQSAGGHALPLGTSPVSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLA
PGQVGVSPVPSPQLPPTCAGPGGPVITAFYPGSPAPSSSAPLAQPSQAPPGLVYTVATST
TPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPTPKPPQKVKAAIAS
IPVGSFEAGAPGRPGPAPRQPLEPGPAREPPASESELEGQPTTPAPPPPPETWAPTARSS
PPPPPPAEERASTKGPETTANKFPSSSSDWRVPGVGLESRGEPPTPPSPAPVPAPAPGSS
SGSSEGSSGRAAGDTPERKEAATTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELP
EFRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSE
PNTPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGF
FPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQAPGAEAPLPGPPPTGT
AAPPVPTPSPAGGPDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPTGPST
AATGR
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaggaaggcgtgcactggcctcccaggtcctggcagcggcggcaagtcc
ccaccagccaccagggccaaggccctgaggcggcgaggggctggggagggcaacaagcca
gaggaggaggacgacgaggcacagcagcagcagcagcagcagcagcagcagcagccaagc
ccagaagaggctgaggagggtgaggaggaggaagctgagcgaggccccggggcagagggg
ctgcccccggagctgcaccccgacgacccagccccaggcccagccgaggaccccaaggta
gagggagaggcaggccgctgggaaccctcactcagccgaaagacagccacgttcaagtct
cgagcgcccaagaagaagtacgtggaggagcatgcaggtggcagtggcagcggtggggcc
gctggggcccctgaagagcgggcgcggacccccgaggaggctggtgccctgggtgtgcct
ccacggccacccacctccacccgctcctcctccactgacacagccagcgagcactcagct
gacctggaggatgagccagctgaagcttgtgggccaggcccctggcccccaggtggcacc
agtggtggctatgatctgcggcaactgcggtcccagcgggtgctggctcggcgtggggat
ggcctcttcctgccagccgtggtgcgccaggtgcgccgaagccaggacctgggtgtgcag
ttccctggggaccgggccctgactttctatgagggggcacctggcggtggcgtggatgta
gttttggatgccacgccaccaccgggcgcactgatggtgggcacagccgtctgtacctgt
gtggagcctggcatggctgcctaccgtgagggtgtggtggtggaggtgaccaccaagcca
gctgcctacaaggtccgcctcagccctggccccagctcccagctgggtccaccagccacc
ctaccacagcccccacagccgccacaccgtgagtccgaggaggctgtatgggtagcccgc
tccagcctgcgcctattgcggcccccctgggaacctgaggccttgcccaggaagccctcc
aaaggccctgaggaggagcaggctgagcctggggccaccctgccaccctgccctgctgcc
ctggaccccaagcagcctgaggatgctgaggtctccaagatcagctttggtggcaacctg
ggagcttgtgaagagggcgaggagaagcacccgccagccctgggcaccccagccctgctc
ccactgcccccaccccagctcttgtcaccgccaccaaagtccccagccttcgcaggccca
ggccgccctggtgagcagccctcaccctgccaggaggggagtcagggcgggagtcgtagc
agcagcgtggcctctctggagaagggggctgcgccggctgcccgggcccgcacgccactg
acagccgcccagcagaagtataagaagggcgatgtggtctgcacacccaacggaatccgc
aagaaattcaacggcaagcagtggcgacggctgtgctcacgcgatggctgtatgaaggag
tcacagcggcggggctactgctcgcgccacctgtccatgcgaaccaaggagatggagggc
ctggcggacagtggcccaggtggggctgggcgacctgccggcgtggcagcccgtgagggc
agcaccgagtttgactggggtgatgaaacttcgcgagacagcgaggccagcagcgtggct
gcccgtggagactcacgcccacgcctggtggcccctgctgatctgtcccgctttgagttc
gatgagtgtgaggcggctgtgatgctggtgtccttgggcagttcacgctcgggcactcct
tccttctctcctgtctccacacagtcgcccttctctcccgccccatcaccctcaccctcg
ccgctcttcggcttccgccctgccaacttcagccccatcaatgcttcaccggtcatccaa
cgcactgctgtacgcagtcgccacctgagcgccagcacccctaagggaggcgtgctgacg
ccaccagacctgggcccccacccgccgccacctgccccccgagagcgccattcctctggc
atcctgcccaccttccagaccaacctgacctttaccgtgcccatcagccctgggcggcgg
aagacagagctcctgccccacccagggacattgggggcccctggcacagggggcggagga
gctgctgcagacttccccaagagtgacagcctagactctggtgtggactcggtgtcccac
acacctacaccgtccacaccggctggcttccgggctgtgtcacctgctgtgcccttctcc
cgctcccgccagccctcaccgttgctgctgttgcccccacctgctggcctgacctcggat
cctgggccctctgtgcgcagggtgcctgctgtgcagcgggactctcctgtcattgtccgc
aaccctgatgtgccgctaccctccaaattccctggggaggtgggcactgccggagaggcc
agggctgcaggacctgggcggggctgccgagagacctcggtacccaccggggtagccagt
gggaagcctggcctgccccctcctctgccagccccagtgcccatcactgtgcctccagct
gcgccaactgctgtggctcagccgatgcccaccttcggcctggcttcttcacccttccag
ccagtggccttccacccctcacctgctgccctgttgcccgtcctggtgcccagcagctac
accagccatcctgcccccaagaaggaagtcatcatgggtcggcctggcacagtgtggacg
aacgtggaacctcgctctgtggctgtgttcccgtggcactccttagtccccttcctggcc
cccagccagcctgacccctctgtgcaaccaagtgaggcccagcaacctgccagccaccca
gtggcctccaaccagagcaaagaacctgctgagtcggccgctgttgctcatgagcagcca
ccaggcgggacagggaatgctgaccctgggcggccccctggagccacatgccctgagagc
ccagggcccggacccccccacactttgggcgtggtggaacctggaaagggcccccctccc
accactgaggatgaggcccctggcgctccaggagagccccggctggacagtgagacggag
agtgaccatgatgatgccttcctctccatcatgtctcctgagatccatttgcctctgcca
cctggcaaacgccggacccagtccctcagtgccctgcccaaggaacgagactcatcttca
gagaaggatggacgcagccccaacaagcgggagaaggaccacatccggcggcccatgaat
gccttcatgatcttcagcaagcgccaccgggccctggtccaccagcgtcatcccaaccag
gacaaccgaactgttagcaagatcctgggcgagtggtggtacgccctgggacccaaggag
aagcagaagtaccatgacctggcgttccaggtgaaagaggcccactttaaggcccaccca
gactggaagtggtgcaacaaggaccggaagaagtccagctcagaggccaagcccacaagt
ctggggctggcaggagggcacaaggagactcgggagcggagcatgtcggagacaggcact
gctgctgcccctggagtgtcctcagagctcttgtccgttgcagcccagacactcttgagc
tcagacaccaaggctccggggagcggctcctgtggggcagaacgtctgcacacagtcggg
ggacctggctcggcccggccccgagccttctcccacagtggcgtccacagtctggatggc
ggggaagtagacagccaggcactacaggaactgacacagatggtgtctggccctgcgtcc
tactctggccccaaaccttccacccaatatggggctccaggtccttttgcagcacctggt
gagggtggtgccctggcggccagtgggcggcctccactgttgcccacccgagcctcccgt
tcccagcgtgcggccagcgaggacatgacaagtgacgaggaacgcatggtcatctgtgag
gaggaaggagatgatgatgtcattgctgacgatggcttcagcaacactgacattgacctc
aagtgtaaggagcgggtgactgacagcgagagcggagacagctctggggaggacccagag
ggcagcaagggctttggccggaaggtgttctcgcctgtgatccgttcctcctttacccac
tgccgtccatcgctggatcctgagcccccaggacccccagatccacctacagcctttggc
aaaggctacggccccaccccgtcttcctcctcatcctcgcctgcctcctcctcagcctca
gcagccacctccttctcactaggctcagggaccttcaaggcccaggagtcaggtcagggc
agcacagcaggcccactacggcccccaccccctggggctgggggcccagcgacaccttcc
aaggctgcacggttcctctcaacggatcctgttaccttccgacgcaagagacctgaaagc
gttggaggcctggacccaccaggtccctcagttattgcggcgcctcctagtgggggagga
agtgtcctgcagacactggtcctacccccaaacaaggaggaacgggagggcagtggagcc
cgcatgccctcggccccagccccatcgctggcctatggggccccagcagcgcccctgtcc
cgcccggctgccaccatggtcaccaacgtagtgcggcctgtcagcagcactcctgtgccc
atcgcctctaaacccttccccacctctggccgggcagaggtgtctccaaatgacacagca
ggtgccaggactgagacggtcactgggtcccgggcacctgggggctccccgctgggtgtc
agcttagtgtattcggacaagaagtcgacagcagccacctcgccagccccacatctggtg
gctgggtccctactgggcactgtggggaaggcacctgctactgtcaccaacctgctggtg
ggcaccccgggttatgggaccccagcaccccctgctgtgcagttcattgcccaaggagcc
cctggcagtggggccactgcgagctcaggagcaggtgctgggagtggccccaatgggcca
gtgccgttgggcatcctgcagccaggtgccctgggcaaggctgggggaatcacccaggtg
cagtacatcctgcccacgctgccccagcagcttcaagtggcgcctgccccagcaccagcc
cctgggaccaaggcagcggctcccagcggccctgcacccaccaccagcatccgtttcacc
ctcccaccgggcacctccaccaatggcaaagtcctggccgccactgcacccactcctggc
atccccatcctgcagtccgtaccttccgccccaccccccaaagcccagtcagtttctcct
gtgcaggccccgcccccaggtggctcagcccagctgctacctgggaaggtactagtgccc
ctggctgcccctagcatgtcagtgcgggggggaggggccggccagccactgcccctggtg
agcccatccttctcagtacctgtgcagaacggcgcccagccacccagcaagatcatccag
ctgactccagtgcctgtgagcacacccagcggcctggtgccgcccctcagcccggccacg
ctccctggacccgcctctcagcctcagaaggtcctgctgccctcctccaccagaatcacc
tatgtgcagtcagcgggcgggcatgcgctgcccctgggcaccagccctgtgtccagccag
gccggaacggtcacctcgtacggccccacaagctcggtagccctaggcttcacctcgctg
gggcccagcggccctgccttcgtgcagcccctgctttcaggccaagccccgctgctggct
cctggccaggtgggcgtgtcgcccgtgcccagcccccagctgcctcccacctgcgcaggc
cccggaggtcccgtcatcacggcgttttaccctggcagccccgcacccagctcctcagcg
cccctggcccagccatcccaggcccccccaggcctggtctacactgtggccaccagtacc
accccacctgctgccaccatcctgcccaagggcccaccagcccctgccactgccaccccg
gcccccaccagccctttccctagtgccacagcaggctccatgacttacagcttagtggcc
cccaaggcccagcggcccaccccaaagcccccccagaaagtgaaggcagccattgccagc
attcccgtgggctcctttgaggcaggtgcccctgggcggcctggccctgcaccccggcag
cccttggagcccggcccagcccgtgagcctcctgcctccgagtctgagcttgaggggcag
cctacaacaccggctcctccaccacccccagagacctgggctcccactgcccggagcagt
cccccgccacccccacctgctgaggagagggccagcaccaagggccctgagactacggcc
aacaaattccccagctcatcttcagactggcgcgtccctggggtgggcctggagagccgt
ggggagcctcccactcctcccagcccagccccagttccagccccagcccctggtagcagc
agtggcagcagcgagggcagcagtgggagggcagccggggacactcccgagcgcaaggag
gcggctactactggcaagaaggtgaaggtgcggcccccgcccctgaagaagacctttgac
tctgtggacaacagggtcctgtcggaggtcgacttcgaagagcgctttgctgagctgccc
gagtttcggcctgaggaggtgctgccttcgcccaccctgcagtctctggccacctcaccc
cgggccatcctgggctcctatcgcaagaagaggaagaactccaccgatctggactcagcc
cctgaggaccccacctcgcccaagcgcaagatgaggagacgctccagctgtagctcagag
cccaacacccctaagagtgccaaatgcgagggggacatcttcacctttgaccgtacaggt
acagaagccgaggatgtgcttggggagctggaatatgagaaggtgccgtactcgtcgctg
cggcgcaccctggaccagcgccgggccctggtcatgcagctcttccaggaccatggcttc
ttcccatcggcccaggccacagcagccttccaggcccgctatgcagacatcttcccctcc
aaggtctgtctgcagttgaagatccgtgaggtgcgccagaagatcatgcaggcggccacc
cccacagagcaggcccctggagccgaggcccccctccctggaccgccccccactggcact
gctgctccccctgtccccactcccagccctgctgggggccctgaccccacctcacctggc
tcggactctggcacggccccagctgccccaccactgcctccacccccagagccggggccc
ggacagcctggctgggaggggcccccccagccttctcccccacccactggcccctccaca
gctgccacaggcaggtga
DBGET
integrated database retrieval system
