Equus caballus (horse): 100069734
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Entry
100069734 CDS
T01058
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100069734 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100069734 (EXOSC2)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100069734 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100069734 (EXOSC2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
100069734
NCBI-ProteinID:
XP_001499276
Ensembl:
ENSECAG00000007897
VGNC:
17732
UniProt:
F6V445
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All DBs
Position
25:34036448..34045727
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AA seq
293 aa
AA seq
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MAMEMRLPVARKPLSESLGRESKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKEEDAGGFIANLEPVSLADREVISRLRNC
IVSLVTQRMMLYDTSILYCYEASLPHPIKDILKPEIMEEIVLETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatgcgccttcccgtcgctcgcaagcctcttagtgagagcttgggccgc
gagagtaagaaacacctggtggtgccgggggacacgatcaccacggacacgggcttcatg
cggggccatggaacttacatgggggaagagaagctcattgcctctgtggctggctctgtg
gagagagtaaacaagttgatctgtgtgaaagctttgaaaaccagatataatggtgaagta
ggagacattgtagtggggagaatcacagaggttcagcagaagaggtggaaggtggagacg
aactctaggctggattcagtcttgcttctctcatccatgaaccttcccgggggagagctg
aggagaagatcggcagaagatgagctggcgatgcgaggcttcttgcaggaaggagacctc
atcagtgctgaggtgcaggcagtgttctctgacggggccgtctctctgcacacgaggagt
ctaaaatacggaaaactaggtcagggcgttttggtccaggtttccccctccctggtgaaa
cggcagaagactcacttccatgacttgccctgtggtgcctcagtgattctgggtaacaac
ggcttcatctggatctaccctacccctgagcacaaagaagaggatgcagggggcttcatt
gcaaacctggagcctgtctcccttgctgatcgagaggtgatctcccggcttcggaactgt
atcgtctcgctggtaactcagaggatgatgctgtatgacaccagtatcctgtattgctat
gaggcatcccttccacatccgatcaaagacatcttaaagccagaaatcatggaggaaatt
gtgttggaaacacgccagagacttttagaacaggagggctaa
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