Equus caballus (horse): 100070514
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Entry
100070514 CDS
T01058
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
ecb
Equus caballus (horse)
Pathway
ecb05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100070514 (PUM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
100070514
NCBI-ProteinID:
XP_023490448
Ensembl:
ENSECAG00000021369
VGNC:
22044
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All DBs
Position
2:25457777..25580246
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AA seq
1193 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSLDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGAFDGDKLGDLKEEGDVVDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGVF
SAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQ
QQAAAAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNS
ALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQ
AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSSS
QSSSLFSQGSAQPASTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSD
LYKRTSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLG
GLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLED
FRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPTERQLVFNEILQAAYQLMVD
VFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQVINEM
VRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI
LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS
QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE
PAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaagctcttgcagctgggaca
cactccagccctgtcccaggatctataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtgcgctctctggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccgcggtcggagagtgggggactaggcgttagc
atggtggagtatgtgttgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtgcc
tttgatggagataagctaggagatttgaaggaggagggtgatgtggtggacaagaccaat
ggtttaccagtgcagaatggcattgacgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccagaggcccaacgcgcttgccgtccagcagctgaca
gcggctcagcagcagcagtatgctctggcagctgctcatcagccccacatcggtgtgttt
tcagcaggtttagctcccgctgcgtttgtccccaatccgtacatcatcagcgctgctccc
ccggggacggacccctacacagctggattggctgcagcagcaacgctaggcccagctgtg
gtccctcaccagtattatggagttacgccctggggagtctaccctgccagtcttttccag
cagcaagccgctgctgccgctgcagcaactaattctgctaatcagcaaaccaccccacag
gctcagcaagggcagcagcaggttctccgtggaggagccagccagcgtcctttgaccccg
aatcagaaccagcagggacagcaaacagatccactagtggcagctgcagcagtgaattct
gctcttgcttttggacaaggactggctgcgggcatgccaggttatccggtcttggctcct
gctgcctactatgaccaaactggtgcccttgtggtgaacgcaggagcgagaaatggtctc
ggcgctcctgttcgacttgtagctcccgccccagtcattattagttcttcagctgcacaa
gcagctgttgcagcggccgcagcttcagcaaatggagcagccggtggtcttgctggaaca
acaaatggaccatttcgccctttaggaacccagcagcctcagccccagccccagcagcag
cccagtaacaacctggcatccagctctttctatggcaacaactctctgagcagcagttcg
cagagcagctccctcttctcccagggctcggcccagcccgccagcacgtccttgggattt
ggaagcagcagttctctcggcgccaccctgggatcggccctgggagggtttggaacagca
gttgcaaactccaacactggcagtggctcccgccgtgactccctgactggcagcagtgac
ctttataagaggacatcgagcagcttgacccccattggacacagtttttataacggcctt
agcttttcctcctctcctggacccgtgggcatgcctctccctagtcagggaccaggacat
tcacagacaccacctccttccctctcttcacacggatcctcttcaagcttaaacctggga
ggactcacaaatggcagtggaagatacatctctgctgctccaggcgctgaagccaagtac
cgcagcgcgagcagtgcctccagcctcttcagccccagcagcacccttttttcttcctcc
cgtttgcggtatggaatgtctgatgtcatgccctctggcaggagcaggcttttggaagat
tttcgaaataaccggtaccccaatttacaactgcgggagattgctgggcatataatggaa
ttttcccaagaccagcatgggtccagattcattcagctgaaactcgagcgtgccacaccg
actgagcgccagcttgtcttcaacgagatcctgcaggccgcctaccagctgatggtggat
gtgtttggaaactacgtcattcagaagttctttgaatttggcagccttgagcagaagctg
gctttggcagaacggattcgaggccacgtcctgtcattggcattgcagatgtatggctgc
cgtgttatccagaaagctctcgaatttattcctgcagaccagcaggtaattaatgagatg
gttcgggaactagatggccacgtcctgaagtgtgtgaaggaccagaacggcaaccacgtg
gttcagaaatgcattgagtgtgtgcagccccagtctttgcagtttatcatcgatgcattt
aaggggcaggtatttgctttgtccacacatccttatggctgccgagtgattcagaggatc
ctggagcactgcctccctgaccagacactccccatcttagaggagcttcaccagcataca
gagcagcttgtacaggatcaatacggaaattatgtaatccagcatgtactggagcacggt
cgtcctgaggataaaagtaaaatcgtggcagaaatccgaggcaatgtgcttgtactgagt
cagcacaaatttgcgagcaatgttgtggagaagtgtgtcactcatgcctcccgtacagag
cgcgctgtgcttatcgatgaggtgtgcaccatgaacgatggtccccacagtgccttatac
accatgatgaaggaccagtatgctaactacgtggtccagaagatgattgatgtggcggag
cccgcccagcgcaagatcgtcatgcacaagatccggccccacatcgcaactcttcgcaag
tacacctatggcaagcacattctggccaagttggagaagtactacatgaagaatggcgtt
gacttagggcccatctgcggcccccctaatggtatcatctga
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integrated database retrieval system
