Equus caballus (horse): 100070729
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Entry
100070729 CDS
T01058
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100070729 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100070729 (EXOSC1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100070729 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100070729 (EXOSC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
100070729
NCBI-ProteinID:
XP_001501548
Ensembl:
ENSECAG00000010621
VGNC:
17730
UniProt:
A0A9L0SI62
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All DBs
Position
1:31988443..31995275
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AA seq
195 aa
AA seq
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MAPPVRYCVPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVVSVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccgtgaggtactgcgttcccggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggtacctacacccggcacggctacatcttttcgtcgcttgctggctgc
ctgacgaagagcagcgagaatggcgcgcttcctgtcgtgtctgtgatgagagaaacagag
tcccaattactgcctgatgtgggggctattgtaacctgtaaggtctctagcatcaattca
cgctttgccaaagtacacatcctatatgtggggtccacaccacttaagaactcttttcga
ggaactatccgcaaagaagatgtccgagctactgaaaaagacaaggttgaaatttacaag
agtttccgcccaggtgacattgtcttggccaaagtgatctccttaggtgatgcacagtcc
aactacctcctgaccactgctgagaatgagctgggggtcgtggtggcccacagtgaatcg
ggtgtccagatggtgcccatcagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggctcgagtacagcctgaattcctgcagacctaa
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