Equus caballus (horse): 100070804
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Entry
100070804 CDS
T01058
Symbol
ERCC2
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03022
Basal transcription factors
ecb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100070804 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
100070804 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100070804 (ERCC2)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100070804 (ERCC2)
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100070804 (ERCC2)
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100070804 (ERCC2)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100070804 (ERCC2)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100070804 (ERCC2)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100070804 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
100070804
NCBI-ProteinID:
XP_023505669
UniProt:
A0A5F5PJ18
LinkDB
All DBs
Position
10:complement(16100620..16116842)
Genome browser
AA seq
769 aa
AA seq
DB search
MPLHSASGAMKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVS
LLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLQFLGLALSS
RKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQHQQDASLPHCRFYEEFDTHGRQVPLP
SGIYNLDDLKAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVV
VFDEAHNIDNVCIDSMSVTITRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEG
LREASAARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQ
ESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYA
KGFTIIIEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKIL
DFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVV
PDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENG
RGAILLSVARGKVSEGIDFVHHYGRAVLMFGVPYVYTQSRILKARLEYLRDQFQIRENDF
LTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRFARADKRGKLPRWIQEHLTDANLNLTVD
EGVQVAKYFLRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcactcagcgagcggcgccatgaagctcaacgtggacgggctgctggtctac
ttcccgtacgactacatctatccggagcagttctcgtacatgctggagctcaagcgcacg
ctggacgccaagggtcatggagtcctggagatgccctcgggcactgggaagacggtgtcc
ctgttggccctgatcatggcataccagcgggcgtatccgctggaggtgactaaactcatc
tactgctcgaggactgtgcctgagattgagaaggtcatcgaggagcttcgaaagttgctc
aacttctacgagaagcaggagggtgagaagctgcagtttttggggctggctctgagctcc
cggaagaacctgtgcatccatcctgaggtgacgcccctgcgctttgggaaggacgttgac
gggaaatgccacagcctcacggcctcctacgtgcgggcgcagcaccagcaggacgccagc
ctgccccactgccgcttctatgaggaattcgacacccatgggcgccaggtgcccctgccc
tccggcatctacaacctggatgacctgaaggccgtggggaggcgccagggctggtgcccg
tacttccttgcccgctactcgatcctgcacgccaacgtggtggtctacagttaccactac
ctcctggaccccaagatcgccgacctggtgtctaaggagctggcccgcaaggcggtcgtg
gtcttcgacgaggcccacaacatcgacaacgtctgcatcgactccatgagcgtcaccatc
acccggcgcaccctggaccgctgccagggcaacctggagaccctgcagaagacggtgctc
aggatcaaggagacggacgagcagcgtctgcgggacgagtaccggcgcctggtggagggg
ctgcgcgaggccagcgccgcgcgggagaccgacgcccacctggccaaccccgtgctgccg
gacgaggtgctgcaggaggcggtgcccggctccatccgcacggccgagcacttcctgggc
ttcctgcggcgcctcctggagtacgtcaagtggcggctgcgcgtgcagcacgtggtgcag
gagagcccgcccgccttcctcagcggcctggcccagcgcgtgtgcatccagcgcaagccc
ctcaggttctgtgccgaacgcctccgctccctcctgcacaccttggagatcgccgacctt
gccgacttctccccgctcacgctcctcgctaacttcgccaccctcgtcagcacctacgcc
aagggttttaccattatcatcgagccctttgacgaccggacccccaccatcgccaacccc
atcctgcacttcagctgcatggacgcctcgctggccatcaaacccgtgttcgagcgcttc
cagtctgtcatcatcacgtctgggacgctgtccccgctggacatctatcccaagatcctg
gacttccaccccgtcaccatggcgaccttcaccatgacgctggcccgggtctgcctctgc
cccatgatcatcggccgtggcaacgaccaggtggccatcagctccaaatttgagacccgg
gaagatattgcggtgatccgcaactacgggaaccttctgctggagatgtccgccgtggtg
cccgacggcatcgtggccttcttcaccagctaccagtacatggagagcaccgtggcctcc
tggtacgagcagggcatccttgaaaacatccagaggaacaagctgctctttatcgagacc
caagatggggctgagaccagtgtcgccctggagaagtaccaggaggcctgcgagaacggc
cgtggggccatcctgctctcggtggcccgtggcaaagtgtccgagggaatcgactttgtg
caccactacgggcgagccgtcctcatgttcggggtcccctacgtctatacccagagccgc
attctcaaggcgcggctggagtacctgcgggaccagttccagatccgtgagaatgacttt
ctcacctttgacgccatgcgccacgcagcccagtgtgtggggcgggccatcaggggcaag
acggactacggcctcatgatcttcgccgacaagcggtttgcccgggcggacaagcggggg
aagctgccccgctggatccaggagcacctcacggacgccaacctcaacctgaccgttgac
gagggcgtccaggtcgccaagtacttcctgaggcagatggcacagccgttccaccgggag
gatcagctgggcctgtccctgctcagcctggagcagctggagtcggaggagacgctgcgc
aggatagagcagatcgcccagcagctgtag
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