Equus caballus (horse): 100070855
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Entry
100070855 CDS
T01058
Symbol
COL19A1
Name
(RefSeq) collagen alpha-1(XIX) chain
KO
K24340
collagen type XIX alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100070855 (COL19A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100070855 (COL19A1)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100070855 (COL19A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100070855
NCBI-ProteinID:
XP_023480907
Ensembl:
ENSECAG00000007420
VGNC:
16729
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Position
20:62708481..63021615
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AA seq
1158 aa
AA seq
DB search
MRHSGCLKLWLWVAVLLLPASAAVTVRDKQEKQCPILRTEGRQFTQDNRDELEVSGFDVG
ESFSLRRVFCEGDHTCFKLGNSLLIRDTIKIFPKGLPEEYAIAATFRVRRSTKKERWFLW
QILDQENMPQVSVVVDGGKKVVEFMFRAAEGDVLNYIFKNRELRLLFDRQWHKLGIGVQS
RGVSLYMDCTLIASRQTDEKDAVDFRGRTVIAARASDGKPVDIELHQLKIYCSSDFIAQE
ACCRMPGTKCPEQDGFESTTSSSVPAHAGKMSIYLPAKQGLKAQCQCIPHKGEAGFPGAP
GSPGQKGDKGEPGAAGIKGEFGAPGVPGVKGENGLHGAPGLPGQKGEQGLEGSKGAIGEK
GEQGEKGDPGLAGINGQDGLKGDLGPRGPPGPKGEKGDTGPPGPPALADSLGIQGPRGPP
GKEGQRGRRGKPGPPGKPGPPGPPGPPGMQGVQQTLGGFYNKGDFGEHGAGGPKGEKGET
GQPGFPGSIGPKGQKGESGEPFLKGEKGDRGEPGIVGSQGIKGEPGDPGPPGLSGSPGLK
GQQGPAGSMGPRGPPGDIGLPGDHGIPGKQGIKGEKGDPGGIVGPPGLPGPKGEAGPPGN
SLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGEAGPPGVGIPGRTGSQGPAGEPGIQG
PRGLPGLPGAPGTPGNDGAPGRDGKPGLPGPPGDPIALPLLGDIGALLKNFCGNCHTSVP
GLKSNKGEEGDAGEPGKYDFAARKVDAGPRGPPGIPGREGPKGSKGERGYPGMPGEKGDE
GLQGIPGITGAPGPTGPPGLLGRTGHPGPVGAKGDKGSEGPPGRPGPPGPPGVPFSEGNG
MSNLYKIQGGVNVPSYPGPPGPAGPKGDPGPAGEPGAMGLPGLEGFPGIKGDRGPAGPPG
IAGISGKPGAPGPPGAPGEPGERGPVGDVGFPGPEGPSGKPGINGKDGLPGAQGIMGKPG
DRGPKGERGDQGIPGDRGPQGERGKPGLPGVKGAIGPVGPPGSKGSTGSPGHQGPPGDPG
APGSLADAVSFEEIKKYINQEVLRIFEERMAVFLSQLKLPAAMLAAQAHGRPGPPGKDGL
PGPPGDPGPQGYRGQKGERGEPGIGLPGSPGLPGTSAPGLPGSPGAPGPQGPPGPSGRCN
PEDCLYPVSHARQRTGGK
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgaggcactctggctgtttgaagctctggctctgggtggcagtgctcctgctcccggct
tccgctgccgtgacggtcagggacaagcaagaaaaacaatgccctatactgagaacagag
ggacgtcagtttacacaagacaacagagatgaacttgaagtttcaggctttgatgtggga
gagagcttttccctgaggcgtgtgttttgtgaaggggatcacacttgtttcaaattggga
aattcacttcttattagagataccattaagatctttcccaaaggccttcctgaggagtac
gccatagcagccacgtttcgtgtacgaagaagcaccaagaaggaacggtggtttctgtgg
cagattctagaccaggagaatatgccacaggtttctgtagtcgttgatggtggaaagaag
gtggtggaatttatgttccgagctgctgagggagatgtgttgaactacatttttaaaaat
cgagaactccgtctcttgtttgatcgtcagtggcataagcttggcatcggagtgcagtcc
aggggcgtttcactctatatggattgtactttaattgcaagccggcaaaccgatgaaaag
gacgctgtggatttccgtgggaggactgttatcgctgctcgtgcctcagacggcaagcct
gtggacattgaacttcaccaactgaaaatctactgtagctcagacttcatagctcaggaa
gcgtgttgcagaatgccggggacgaagtgtccagagcaggatggctttgaaagtaccaca
tcgtcatcagtacctgctcatgccggtaaaatgtctatatatctgccagcaaaacaggga
cttaaagcccagtgccagtgcattccacacaagggagaagcaggattcccgggagctcca
ggttcacctggtcagaaaggggataaaggagaaccgggtgcagctggtattaaaggtgaa
tttggtgctcccggagttcctggagtaaagggtgaaaatggtttacatggagctccaggc
ttacctggtcaaaagggagagcaaggtttagaaggcagcaaaggagcaatcggtgaaaag
ggcgaacaaggagaaaaaggagatccagggttggctggcattaatggacaagacggtttg
aaaggtgacttgggtcctcgtggtccacctggcccgaaaggagaaaagggagatacggga
cccccaggaccaccagccttagctgattccctggggatccaaggcccccgaggtccacct
ggaaaagagggtcagaggggaagacgaggaaaaccaggtcctccaggaaaaccagggccc
ccaggaccacctggacctcctggaatgcaaggagtacagcagactctgggtggattttat
aacaagggagactttggtgaacatggagctggtggcccaaaaggagagaagggtgaaact
ggacaaccaggatttccggggtccattggccctaaaggtcaaaagggagaatctggggaa
cctttcctcaaaggtgaaaagggagacagaggagaacctgggatagttggatcacaggga
ataaagggtgaacctggagatcctggtccccccggtttatcaggaagcccaggactaaag
ggtcagcaaggacctgcaggttctatgggacccagaggaccaccaggagacattggattg
ccaggagaccacggtatcccgggaaaacaaggcatcaaaggagaaaagggagatccaggt
gggattgtgggccctcccgggcttccaggtccgaaaggtgaggctgggcctccagggaac
agcctgcctggcgaaccaggattagacggaaatcctggagcgcctggtccacgtgggcca
aagggcgagagaggcctgcccggtgtccatgggtccccaggtgaggctggccctccaggg
gtaggaattcctggccgaacgggctcccaaggaccagctggagagccaggcattcagggt
cctcgaggtctccctgggttgccaggagctccagggacccccgggaatgatggagctcca
gggagggatggaaagccaggcctgccaggccccccaggtgacccgattgcgctgcccctc
ttgggagacatcggcgctttgcttaagaacttctgtggcaactgccacaccagcgtccct
gggctgaaaagcaacaaaggagaagaaggagacgctggagagcctgggaagtacgacttc
gcggcccggaaggtggacgcagggccccgtggtcctccaggaatcccaggcagagaagga
ccaaagggcagcaaaggagagcggggctaccctgggatgcctggggagaaaggcgacgag
ggtcttcaaggaattccaggcattacaggtgctccaggtccaactggaccccctggcttg
ttgggaagaactggacatcctggtcctgtgggagcaaagggtgacaagggcagcgaggga
ccccctgggagacctggaccacccggaccacccggtgtaccattcagtgaaggaaatgga
atgagcaatttatataaaatccagggaggtgtgaatgttcccagttatccagggccaccc
ggccccgctggtccaaaaggcgatcctggcccagcgggagaacctggtgcaatggggttg
ccaggactagaaggatttccaggtataaagggagaccgaggcccagcagggcccccagga
atagccgggatatcgggaaaacctggagcccccgggcccccaggagctccaggggaaccg
ggtgagagaggacctgttggagatgtaggtttccctggaccagaaggaccctcaggaaag
ccaggaataaatggaaaagatggattaccaggtgcccagggcatcatgggtaagcctgga
gacagaggccccaaaggagaacgtggtgatcagggaatcccaggagacagaggcccacaa
ggcgaacggggaaaaccaggccttccaggcgtgaagggggccatagggcctgtggggcca
ccaggaagcaaaggctccacgggatcccccgggcaccaaggccctcccggcgatccaggt
gcccccggctctctggctgatgcagtttcatttgaagaaataaagaagtatattaatcaa
gaggttctaaggatttttgaagagaggatggctgtgttcctgtcccagctcaagctaccc
gcagcaatgttggccgctcaggctcatgggagacctgggccaccaggaaaggatgggtta
cctgggccaccaggagaccccggaccccaaggctaccgaggacagaagggagaaagaggg
gaacctggcattgggcttccagggagcccgggccttcctgggacctcagctccgggtttg
ccaggctcaccaggggccccagggcctcagggccccccaggacctagtggacgatgtaac
ccagaagattgcctctatcccgtgtctcatgcccgtcagcggacaggtgggaaataa
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