Equus caballus (horse): 100070862
Help
Entry
100070862 CDS
T01058
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100070862 (GAPVD1)
Membrane trafficking [BR:
ecb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100070862 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
100070862
NCBI-ProteinID:
XP_023484633
Ensembl:
ENSECAG00000012787
VGNC:
18244
LinkDB
All DBs
Position
25:29681193..29743059
Genome browser
AA seq
1460 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKHLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPSQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYITYSQLITLVNF
MKSVMSGDQLREDRMALDNLLANLPQAKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRNRTNVLMDLHMDHEGSSQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDEITHGAHQLTSPPSQSESLLAMFDPLSSHEGASAV
VRPKVHYARPSHPPPDPPILEGAVGGHEARLPNFGSHVLTPAEMEAFRQRHSYPERLVRS
RSSDIVSSVRRPMSDPSWNRRPGNEERELPPAAAIGATSLMAAPHSSSSSPSKDSSRGET
EERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDDPSP
RLSAQAQVAEDILDKYRNAIKRTSPSDGAMANYESAEVLGDGESAHDSPRDETLQNISAD
DLPDSASQAAHPQDSAFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEI
VCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLT
RCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAA
DDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDI
LRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCIL
RMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES
YWWMQFTAAVEFIKTIDDRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatattcatactctggcccatcaccttaagcaggaacgcttgtatgta
aactctgagaaacagctcattcagaggctcaatgcagatgtgcttaagacagctgagaag
ttgtatcgtacagcatggattgctaagcaacagagaattaatttggatcggcttatcata
accagtgctgaagcttctcctgctgaatgttgccaacatgccaagattttggaagataca
cagtttgttgatggatataagcatttggggtttcaggagactgcttatggagaattcttg
agtcgattaagggaaaatcctcgtcttattgcctcctctttggttgctggagagaaactt
aatcaggagaacacacaaagtgttatttacacagtttttacctccctctatggcaactgc
attatgcaagaagatgaaagctacctccttcaggttttgagatacttgattgaatttgaa
cttaaagaaagtgacaaccccaggcgacttttgaggagaggaacttgtgccttcagcatc
ttattcaaacttttttctgaaggactgttttctgccaaacttttcctcacagctacttta
catgagccaatcatgcaactgcttgttgaagatgaagatcacctggaaacagatccaaac
aagctaattgagaggttctccccatctcagcaggaaaaactcttcggggagaaaggctca
gatagattcaggcaaaaggtccaagagatggtggattccaacgaggccaaactggtggcc
ttggtgaacaaattcattggttatctcaaacagaacacgtactgcttcccacacagtttg
aggtggattgtgtcacagatgtacaaaaccctctcctgtgtagacagactggaagttggg
gaggtcagggcaatgtgtactgatctcctattggcttgcttcatttgtcccgcagttgtc
aatccagaacagtatggaataatttctgatgctcctattaatgaggtggcaagatttaat
ctgatgcaggtcggccgcctcttacagcagttagcaatgactgggtctgaagagggagat
ccccggacaaagagcagccttggaaaatttgacaaaagctgtgttgccgctttccttgat
gttgtgattgggggccgtgcagtggagacgccgccaatgtcctccgttaatcttctggaa
gggttgagcagaactgtggtttatatcacctacagtcagcttattactctggtgaatttt
atgaagagtgtgatgtctggagatcaactgagagaagatagaatggctcttgacaattta
ttggcaaacctcccgcaggcaaagccaggcaaaagcagcagtttggagatgactccctac
aatactcctcagctgtctccagcaaccactccagcaaataaaaagaaccgattgccgata
gcaactcggagcagaaatcgcaccaatgtgctaatggacttacatatggaccatgaagga
tcgtctcaagaaaccatccaggaggtacagccagaagaggtgttggtcatttccttaggg
acgggtccccagctaactccagggatgatgtcagaaaatgaggtcctaaacatgcaactt
tcggatggaggacaaggagatgtccctgttgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgctctaattcagtatcctctctagacctggaaggagagtctgtatcagaacttgga
gcgggaccttctgggagtaatggagttgaagctctacaactcttagagcatgagcaagct
acaacacaagataatctcgacgataagctaaggaagtttgaaattcgtgacatgatggga
ctgacagatgatagggacatatcagaaacagtgagtgagacctggagtacagatgtcttg
ggaagtgactttgaccccaacattgatgaagatcgcttgcaggaaattgcgggtgcagca
gcagagaacatgttaggcagtttactgtgcctgccaggttcagggtcagtactgcttgac
ccctgcactggttctaccatatcagagacgacaagcgaagcttggagtgtagaggtattg
ccaagtgactcagaggccccagatctaaagcaggaggagcgcctgcaggaactggagagc
tgttctggactgggtagcacatctgatgatacggatgtcagggaggtcagttcccgcccc
agcactccaggcctcagtgttgtgtcgggcataagtgcaacctctgaggatattcctaat
aagattgaagacctgagatctgagtgcagctctgattttggaggtaaagattctgtcact
agtccagacatggatgaaataactcatggtgcccaccagctgacctctcctccttcgcag
tctgagtctctgcttgccatgtttgatccactgtcttcacatgaaggggcctctgctgtg
gtaaggccaaaggttcactatgccaggccatcgcatccaccaccagatcccccaatcctg
gaaggagctgtgggaggacatgaggccaggttgccgaactttggttcccatgttttaact
ccggctgaaatggaggccttcaggcaaaggcattcttaccctgagagattagttcgcagc
aggagctctgatatagtgtcttctgtccggcgacccatgagtgaccccagctggaatcga
cgtccagggaatgaagagcgagaactccctccagccgcagccattggtgctacttctttg
atggctgcacctcattcatcatcttcatccccgagtaaggactcctcaagaggagagact
gaagaacgcaaagatagcgatgatgagaaatcagacaggaacagaccttggtggagaaaa
cgttttgtttctgccatgccgaaagctcctataccatttagaaagaaagaaaaacaagaa
aaagacaaagatgatctggggcctgacagattctcaacactcacagatgatcccagccct
agactcagtgcgcaagctcaggtcgctgaggatattctggacaaatacagaaatgccatt
aaacgaaccagccccagtgacggagcgatggcaaactatgaaagtgcagaggttctgggt
gatggtgaaagtgcacatgattctcctcgtgacgaaacgctgcagaacatctcggctgac
gacctcccagactccgcgagccaagcggcccaccctcaggactccgctttctcttacaga
gacgcgaaaaagaaactgaggcttgccctttgctctgcggattctgtcgctttcccagtg
ctaacccattcaaccaggaacggtttacctgatcataccgatccagaagataatgaaatt
gtatgcttcttaaaagttcaaatagctgaagcaattaatttacaagacaagaatttaatg
gctcaacttcaagagacaatgcgttgtgtgtgccgctttgataataggacttgtaggaaa
ctgctggcttcaattgccgaggactacaggaaaagggccccctatattgcttatctcact
cgctgtcgacaaggactacagaccacacaggctcacctggaaaggctactgcaaagggtt
ttgcgggacaaagaggtggccaatcggtactttaccactgtctgtgtgaggctgctgctg
gagagcaaagagaagaagatcagggagttcattcaagactttcagaaactcacagcagct
gatgataaaactgctcaggtagaagattttctgcagttcctttatggtgcgatggcccag
gatgtcatatggcaaaatgcgagtgaggagcagcttcaggatgctcagctggccattgaa
cgaagtgtgatgaatcggattttcaagcttgccttctaccctaaccaggatggggacata
cttcgtgaccaggttcttcatgaacatattcagagactgtcgaaagtagtgactgccaat
cacagagctcttcagattccagaggtttatcttcgggaggcgccgtggccatctgcacag
tcagaaatcaggacaataagtgcttataagacaccccgggacaaagtgcagtgcatcctg
agaatgtgctccacgatcatgaacctcctgagcctggccaacgaggactccgtccctggc
gcagatgactttgtcccagttttggtgtttgtgttgatcaaggctaatccaccctgcttg
ctgtccactgttcagtacatcagtagcttttacgccagctgtctgtctggagaggagtcc
tattggtggatgcagttcacagcagcagtggagttcatcaaaactatcgacgaccgcaag
tga
DBGET
integrated database retrieval system
