Equus caballus (horse): 100071156
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Entry
100071156 CDS
T01058
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100071156 (RTF1)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100071156 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
100071156
NCBI-ProteinID:
XP_023475349
Ensembl:
ENSECAG00000020872
VGNC:
22610
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All DBs
Position
1:complement(148716273..148757714)
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AA seq
710 aa
AA seq
DB search
MRGRLCVGRAVVVAAAVAVPLAGGQEGSPGGVRRGSRGTTMVKKRKGRVVIDSDTEDSGS
DENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDSDDEWTFGNNKNKKKGKARKT
EKKGTLKKQTNKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHD
GYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKK
KKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELL
AKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELN
RVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQLGGT
RTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIK
EALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLN
ELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRRQCK
PTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQGKDKDLNSKSASDLSEDLFK
VHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctttgtgtgggtcgagcggtggtggtggcggcggcagtggcggtccca
ctggcaggcgggcaagaggggagtccgggcggcgtccggcgtgggagccgggggacgacc
atggtaaagaagcggaaaggccgcgtcgtgatcgactcggacacggaggacagcggcagc
gacgagaacctggatcaggagctcctgtccctggcaaagcgaaagcgcagtgactctgag
gagaaggagcctcctgtgagtcagcctgcagcctcctcagactctgagacgtccgacagt
gatgatgagtggacatttgggaacaataaaaataagaagaaaggaaaggccagaaaaaca
gagaagaaaggaactctgaagaagcagaccaacaaaactgcttcctcgggcagttcggac
aaagacagctcagccgagagctcagcccctgaggaaggtgaagtatcagattctgacagc
aacagctcttcctccagttcagattcagactcttcctcagaagatgaagagttccatgat
ggctatggagaagacctcatgggagatgaggaagacagggcccgtctggaacagatgaca
gagaaagagagagagcaagaactgttcaaccgcatagagaagagggaggttttgaaaaga
agatttgaaatcaagaaaaaactaaaaacagccaaaaagaaagaaaagaaagaaaaaaag
aaaaagcaagaagaggagcaggagaagaaaaagctgacgcagattcaagaatctcaggtg
acgtcccacaacaaggaacggcgttccaagcgggatgagaaactggataagaaatctcaa
gccatggaggaactaaaggcagagcgagaaaaacggaagaacagaacagctgagctcctt
gccaaaaaacagccattaaaaaccagtgaggtgtactctgacgatgaggaggaggaagag
gacgacaagtccagtgaaaagtcagaccgttcgtctcgaacatcgtcgtctgatgaagag
gaggagaaagaagagatcccaccaaaatcacaaccagtctccttacctgaggaattgaat
cgagttcgattatcacggcataagctagaacgctggtgtcacatgcccttctttgctaaa
actgtcacaggatgttttgtacggattggcattggaaaccacaacagcaaaccagtttac
cgggttgctgagatcactggtgttgtggaaactgccaaagtttaccagcttggtggcacc
agaacaaacaaagggctacaactacggcatggcaatgaccaacgcgtgttccgcctagag
ttcgtctcaaaccaggaattcactgaaagcgaatttatgaagtggaaagaagcgatgttc
tctgctggcatgcagttgcccactctagatgaaatcaataagaaggaattatctattaaa
gaagctcttaattataaattcaacgatcaggacattgaagagattgtaaaagagaaagag
aggttcaggaaagccccacccaactacgctatgaagaagactcagctgctaaaggaaaag
gccatggctgaggacctcggggatcaggacaaggccaaacaaatccaagaccagctgaac
gagctggaggagcgggcagaggccctggaccgccagcggaccaagaacatatctgctatc
agttatatcaaccagcggaaccgggagtggaacattgtggagtctgagaaggcccttgtg
gctgaaagtcacaacatgaaaaaccaacagatggatccctttaccaggcggcagtgcaaa
cctaccatcgtttctaactccagagacccagctgttcaagctgccatcttggcccagctg
aatgcaaagtacggttctggagtgttaccagatgctccaaaggaaatgagcaagggtcag
ggaaaggataaagatttgaattctaagtcagccagtgacctctcagaagacttgttcaaa
gtacatgatttcgatgtgaagattgatttacaagttcccagctcagagtcaaaggctttg
gccatcacctccaaggctccgccagccaaggacggggctcccaggagatctctgaacttg
gaagactacaaaaagcgacgggggcttatttga
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