Equus caballus (horse): 100071201
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Entry
100071201 CDS
T01058
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100071201 (SOX30)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100071201 (SOX30)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100071201
NCBI-ProteinID:
XP_005615021
Ensembl:
ENSECAG00000016620
VGNC:
23461
UniProt:
F6X1G2
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Position
14:20747650..20786747
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AA seq
767 aa
AA seq
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MERARPEPPPQPRQLPRATPPRPLRPAPPPLPVEGSSFRAAAAEPPPLPPGSGAAAMASS
CREAPASGVQPAARRLLQVKPEQVLLLPPGPSLPQARDDGAAASPAQARLLQLRPELLLL
PPPPPPSPSEGAPCRPELHPVQPRALHVKAEKQEPGSGLEPSVGPRRAVEAGPRASRAAK
AEGPGLAVGSRRGDEKKGKLAVEEVMRDAAKGGEGKSLAALRERVIKTEQPESLREDCRL
GAEPASNGLVRGSKEVILAQPSNAFGPHQQDLRIPLTLHPVPPGARIQFQGPPPSELIRL
TKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMV
WARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVY
QPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGEAP
PAIQLPTPAVQRPNPIPLFQPSVSSTAPVAVQAPSLPLCPALPPQHFSGPSQTDTHRLHS
GASLSVKRATPVSLESTNKIPTSASTAHARFATSTIQPPKEYPSVSACPRSAPIPQAPPI
PHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMP
ECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESVDGTSYYNSHSHGGEE
YLNPVPQLDIGALENVFTAPTSTPSSIQQVHITDSDEEEEEKVLRNL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggagagggccaggccggagccgccgcctcagccgcgccaactgccgcgggcgaccccg
ccgcgcccgctgcgccccgctccgcccccgctgccggtcgagggctcctcctttcgggcg
gcggccgccgaaccccctccgttgccgcccggctcgggcgcggccgccatggcctcgtcg
tgcagggaggccccggcgtctggcgtccagcccgcggcacggcggctgctgcaggtgaag
ccggagcaggtgttgctgctgccgccagggccatccctgcctcaggcccgggacgacggc
gccgccgcctcgcccgcgcaggcgcggctgctgcagctgaggcccgagctgctgctgctg
ccgccgccgccgcctccgtccccgtccgagggcgccccttgcaggcccgagttgcacccg
gtgcagccccgggcgctgcacgtcaaggccgagaagcaggagccggggtccggcttggag
ccatcggtggggccgcggagggccgtcgaggcgggccccagggcttccagggcggccaag
gcggaaggccccggactggccgtcggcagccgccgaggggacgagaagaagggcaagttg
gcggtggaggaggtcatgagggacgcggcgaaaggcggggaaggcaaaagcctggcggcc
ctccgagaaagagtcatcaaaacggagcagcccgagagtctccgcgaggactgcaggctc
ggcgcggagcccgcgtccaatggcctggtccgcggcagcaaggaggtcatcctggcccag
ccgtccaacgcctttggtccgcatcagcaagacctcaggatccctttgactctccaccct
gtcccccctggggcccggattcagtttcagggacctcctccgtcagagctgatacggttg
accaaggtccccttgacaccagtgcctattaaaatgcagtccttactggagccttctgta
aaaattgaaaccaaagatgtcccgctcaccgtgcttccctcagatgcaggaataccagac
acacccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatggtt
tgggcaaggatccaccggccagcactagccaaagctaacccagcagccaacaatgcagaa
atcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccctat
tatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtttat
cagcctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgtattttctggt
accacacaaaatatcatctctacgaatcctacaacaatttatccttatcgctcacctacc
tactctgtggtaattcccagcctacagaacaccatcactcatccagttggtgaagcccca
cctgccatccagctgcccacccctgcagtccagcgcccaaaccccatcccacttttccag
cccagcgtctccagtacggccccggtggctgtccaggctccaagtctgcccctctgtcca
gcactcccaccccagcacttttctgggccctctcaaacggacactcatcggctgcattcc
ggagccagtctctctgtgaagagagccactcctgtctctctggagagcactaacaagatt
ccaactagtgcaagtactgcccatgccagatttgcaacctcaaccatccagcctcccaag
gagtatcccagcgtttccgcttgtcccagaagtgctccaatcccccaggctcctcctatt
ccacattcacatgtctaccagccccctccccttggtcatccagccacattgtttgggaca
ccaccgcgattctcttttcatcacccttacttcctacctggacctcactacttcccatca
agcacgtgcccttatagtcggcctccttttggctatggaaactttccaagttcaatgcca
gaatgccttggttattatgaagacaggtaccaaaaacacgaggctatgttttcagcttta
aatagagactatccttttagagactacccggatgaacgcacgcacagcgaagattctcga
agttgtgagagcgtggatgggacctcttactataacagtcatagccacggtggggaggag
tacttaaatcccgtacctcagctggacattggagccttggaaaacgtcttcacagcccca
acatcaactccctccagcatccagcaagtccacatcactgacagtgatgaggaggaagaa
gaaaaagtgctcaggaatttataa
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