Equus caballus (horse): 100071225
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Entry
100071225 CDS
T01058
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
ecb
Equus caballus (horse)
Pathway
ecb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100071225 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecb04121
]
100071225 (TRIM54)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100071225 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF349
Sina_RING
CoiA_N
MIF4G_like_2
PHP
COG2_C
UvrD_C
DD_DDX21-DDX50
Zn_ribbon_FGT1_2
DUF5799
DUF1421
GH123_cat
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100071225
NCBI-ProteinID:
XP_005600182
Ensembl:
ENSECAG00000001386
VGNC:
24515
UniProt:
A0A9L0S136
LinkDB
All DBs
Position
15:complement(69956317..69974839)
Genome browser
AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKTELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCSVLEERKGELLQALAKEQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASREEEDEEVALDGEEGSAGPEEERPDRP
EGTVPK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccagtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttcaggaggtcgtttccgctgcccatct
tgcaggcatgaagttgtcctggaccgacatggtgtctatggcctgcagcgaaacctgcta
gtggagaacattattgacatttataagcaggagtcttcccggccactacactccaaggct
gaacagcacctcatgtgtgaggagcatgaagatgagaagatcaatatctactgcctgagc
tgtgaagtgcccacttgctctctctgcaaggtcttcggtgcccacaaggactgtgaggtg
gccccactgcccaccatttataaacgccagaagactgagctcagtgatggcatcgcgatg
ttggtggcaggcaatgatcgtgtgcaagcagtgatcacacagatggaggaagtgtgccag
accatcgaggacaacagcaggaggcagaagcagctgctaaatcagaggttcgaggccctg
tgctcagtgctggaagagcgtaagggtgagctgctgcaggcactggccaaggagcaggag
gagaagctgcagcgggttcggggactcatccgccagtacggggaccacctggaggcctcc
tctaagctcgtcgagtccgccatccagtctatggaggagccacaaatggcgctctacctg
cagcaggccaaggagctgatcaataaggtcgggacgatgtcgaaggtggagctggcagga
cggccagagccgggctatgaaagcatggagcaattcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccagccgggcgcttcccgggaggaagaggatgaggag
gtggcattggacggggaagagggcagcgcagggcccgaggaagagcggccggatcggccg
gaaggcacagtcccgaagtga
DBGET
integrated database retrieval system
