Equus caballus (horse): 100071467
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Entry
100071467 CDS
T01058
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100071467 (SRRM1)
03015 mRNA surveillance pathway
100071467 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100071467 (SRRM1)
03041 Spliceosome [BR:
ecb03041
]
100071467 (SRRM1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100071467 (SRRM1)
Spliceosome [BR:
ecb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100071467 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
100071467
NCBI-ProteinID:
XP_023491249
Ensembl:
ENSECAG00000026981
VGNC:
23595
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All DBs
Position
2:complement(30546905..30577286)
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AA seq
915 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKETSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKARHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPMTKSGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSP
PASKRRSPSLSSKHRKGASPSRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASSS
PQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPATKKPPAP
PSPVQSQSPSTNWSPAVPIKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKK
HKKHKKEKAAAAAAAVTPVAAAAPTTTSAQEEPEAEPEPRKETESEAEDNLDDLEKHLRE
KALRSMRKAQVSPQS
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatctggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagag
tttatgggagaactgtggcccctgctgttaagtgcacaggaaaacatcgctggaatccct
tctgctttcctagaactgaagaaagaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaagataagagggataaggaagaaaaagaa
accagcagagaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacggtcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgccacagaaccaagagccggagtccttcccctgctccagaaaagaaggagaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacgtct
actagtgacatcctgaaagttcccaagcctgaacctgtaccagagcctaaggaaccttct
ccggagaaaaattccaaaaaagagaaggaaaaggaaaagacccgaccaagatcgcggtct
cgttccaaatcaagatcccggacacgttctcgctctccttctcatactcgacctaggcgg
cgccacaggtcccgatcacgatcatactcacctagaaggcggccaagcccaagaaggcgg
ccatctcctcgaagaagaactccaccaagacgaatgcctcctccaccaaggcataggagg
agcagatcgccagtgagacgaaggcggcgctcgtcagcatccttgtctgggagcagctcg
tcatcctcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcgaaaaactcgcaggttatctccttcagcgagccctccgaggcgaaggcacagg
ccgtcacctccagcgagtccaccgccaaaagctcgtcactccccaacaccccagcagtca
aaccgtacaaggaaaagtcgagtttctgtctctccagggagaacttcaggtaaagtgacg
aaacataaaggtactgagaaaagagagtccccttcaccagcacccaagcctagaaaagta
gaattatctgaatcggaagaagataaagggggcaaaatggctgcagccgactcggtgcag
cagagacgccagtacagacgccagaaccagcagtcgtcgtcagattctggctcctcctcc
tcttcggaagatgagcgacccaagaggtcccatgtgaagaacggggaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccctcacctcgaaagcgccagaaagagact
tcccctcggatgcagatgggaaagcgatggcaatcgccaatgactaaaagcggcagacgg
aggaggagcccctccccaccacccgccagaaggcgacgctctccttctcctgcccctcct
cctcgacggcgcaggtctcccacgccaccaccgcgccgaaggactccttctcctccgcca
cgtcggcgctccccttccccgagaagatactctcctcccatacagaggagatactctcct
tctccacctccaaagagaaggacggcctcccctcctccccctcctaagcgaagggcgtca
ccatccccgccaccaaagcgccgggtctcccactccccgccgcccaaacagagaagcccc
ccggcctccaagagacgctcgccttcgttgtcatcaaagcataggaagggggcctccccg
agccgatccacccgggaggcccggtcaccacagccaaataaacgacattcgccctcaccg
cggcctcgagctcctcagacctcaagtcctccacctgttcgaagaggagcgtcatcatca
ccccaaagaaggcagtccccatctccaagtacgaggcccattaggagagtttccaggact
ccggaacccaaaaagacaaaaaaggctgcctctccaagccctcagtctgtaaggagggtc
tcatcctccagatctgtctcaggatctcctgagccagccactaaaaaaccccccgcacct
ccatcccccgtccagtctcagtcgccctctaccaactggtcaccagcggtacccatcaaa
aaggctaaaagcccaacgccaagcccgtcaccggcaaggaattcggaccaagaaggaggt
ggaaagaagaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaagaag
cacaaaaaacacaagaaggaaaaggctgcggctgcggctgctgctgtaacgcctgtggcc
gccgctgcccccacaaccacgtcagcacaggaggagccggaggcggagcccgagccccgg
aaggagactgagagtgaagccgaagataaccttgatgacttagaaaagcacctgcgtgaa
aaggccctgaggtcaatgcggaaggctcaagtgtccccacagtcttag
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