Equus caballus (horse): 100071641
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Entry
100071641 CDS
T01058
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100071641 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
100071641 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100071641 (PABPC4L)
03041 Spliceosome [BR:
ecb03041
]
100071641 (PABPC4L)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100071641 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
100071641 (PABPC4L)
Spliceosome [BR:
ecb03041
]
Complex C
Other components
Complex C specific factors
100071641 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Nup35_RRM
RRM_7
MARF1_RRM1
Nup35_RRM_2
DUF4523
RRM_8
DUF6262
Motif
Other DBs
NCBI-GeneID:
100071641
NCBI-ProteinID:
XP_014593480
UniProt:
A0A3Q2GWP2
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All DBs
Position
2:96576971..96583033
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AA seq
370 aa
AA seq
DB search
MNVAAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQ
LADAQKALDTMNFDTIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMSDDQGSRGYAFVHFQNQMAADRAIEEMNGALLKDCRLFVGRFKNRQDREA
ELQNKANEFTNIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSKGFGFVSFYSH
EAAQKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQERFRRCQGVKLYIKNL
DDTIDDEKLRREFSSFGSISRVKVMKEEGRSKGFGLICFSSPEEATRAMTEMNGRILGSK
PLNIALAQRP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagccaagtaccgccaggcctccctgtatgtgggggacctccatgcagat
gtcaccgaggacctgctgttcaagaaattcagcactgtggggcccgtgctgtccatccgc
atctgcagggacctggtcacccgccgctctctgggctatgcctatgtgaacttcctgcag
ctggctgatgcccagaaggccctggacacaatgaactttgacacgatcaaaggcaaatcc
atccgcctcatgtggtctcaacgtgacgcctacttaaggaaatctgggattgggaacgtg
ttcatcaagaatctggacaaatccattgataacaaaaccctttatgaacatttttcggcc
tttgggaagatcctgtcctccaaggtgatgagcgatgaccaaggctccaggggctatgcg
tttgtgcactttcagaaccagatggccgcagatagggccatcgaggagatgaacggggcg
ctgcttaaggactgcaggctgtttgttggcagattcaaaaaccgccaagatcgggaagcc
gagctccaaaacaaagccaatgaattcaccaatatttacatcaaaaactttggagatgac
atggatgataagagactggaggaagttttcagtaaatatggcaaaactgtgagtgttaag
gtgatgacagactccactgggaaatccaaaggctttggctttgtgagtttttatagccac
gaggctgcccaaaaggccgtggaagaaatgaatggaaaggatataaacggacagctgctc
tttgtaggccgggcacaaaagaaagcagagcgacaggctgaattaaagcaaatgtttgag
cagcagaaacaggaaagatttcggcggtgccagggggtgaagctctacattaagaacctc
gatgacaccattgatgatgaaaaactacggagggagttttcttcctttggatcaattagc
agagtcaaggtgatgaaggaagaagggcgaagcaaaggctttggcttgatctgcttctcc
tctcctgaagaggccaccagagcaatgactgagatgaatggccgcatcttgggctccaag
ccactcaacatcgccctggcgcagaggccctag
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