Equus caballus (horse): 100071855
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Entry
100071855 CDS
T01058
Symbol
HPS5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100071855 (HPS5)
Membrane trafficking [BR:
ecb04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
100071855 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_EML_2
PEP5_VPS11_N
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_Vps41
ribosomal_L24
Motif
Other DBs
NCBI-GeneID:
100071855
NCBI-ProteinID:
NP_001296128
Ensembl:
ENSECAG00000015720
VGNC:
18863
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All DBs
Position
7:complement(88737185..88773437)
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AA seq
1129 aa
AA seq
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MTSVPVIPESYSHVLAEFESLDPLLSALRLDSSRLKCTSIAVSRKWLALGSSGGGLNLIQ
KDGWKHRLFLSHREGAISQVAFCLHDDDYVAVATSQGLVVVWELNQERRGKPERIYMSSE
HKGRKVTALCWDTAILRVFVGDHMGKVSAIKLNTSKQAKAAAAFVMFPVQTIMTADSCVV
QLDFLDGRLLISSLTRSFLCDTEREKFWKIGNKERDGEYGACFFPGRCSADQQPLIYCAR
PGSRMWEVNFDGEVISTHQFKKLLSSPPLPVITLRTEPQYDHTVGSCQSLSFPKLLHLSE
HCVLTWTERGIYIFLPQNVQVLLWSEVKDIQDVAVCKNELFCLHLSGKVSHLSLLSVERC
VERLLRRGLWNLAARTCCLFQNSVIASRGRKSLTVDKLEHLKSQLDLTTCSDLISQLEEL
ILKFEPLDSACSSRRSSISSHESFSILDSGIYRIISSRRGSQSDEDSCSLHSQTLSEDER
LKEFASHQEEDQPDQCCGSQGNEDNVSHVPVTFETEKNETFLPFGIPLPFRSPSPLVSLQ
AVKESVSSFVRKTTEKIGTLHTSPDLKVRPEPRGDEQSCEEDVSPVICPKEEDTEEEKEV
TSQPPEEDKLQELRIATAEAMTKLEDPLVLFEPKSLRMVLQQWLSQLEKAFAIKDFSGIS
DAGNSSMTSNQDVLLLDESKKGILDEDNEKEKRASLSNEETVDQTVCDSVNNLREPLDDL
FQVCSPCSIANDLQKDLAELTTLCLELNVLNSEMKSTSGHADHTLQQCSPETLACQFLKK
YFFLLDLTRAKESIKLSYTDSPCVWDTFIEGLKEMASCSPTYMEMGEGDLPTRLKLLDDS
VPFDSPLLVAYAARLYERFGESALRSLIKFYPSILPADVMQLCHHHPAQFLAYLDSLVKS
RPEDQRPSFLESLLQPESLRLDWLLLAVSQDAPPSTSTVDEEGDPRPHSHLFSWGYSQLI
LHLIKLPADFTSKEKMTDICRSHGFWPGYLILCLELQRRKEAFTNIVYLNDMSLMEGDSG
WIPETVEEWKLLLHLVQNKSTKPAPQKSPNGNFNDGPSPINVENVALLLAKAMGPDRAWS
LIQECGLTLELSERFTRTCNILRIAEKRQRALIQSMLEKCDRFLWSQQA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgtgccagtgatacccgagtcttacagccatgttctcgcagagtttgagtct
ctggatccgttactttcagcgctgagactggactccagtcgtctaaagtgcacgagcata
gctgtgtcccggaaatggttggctttgggcagttcaggaggaggactcaatctcattcag
aaagacggctggaagcacaggctttttctttcacacagggaaggtgcaatttctcaggtt
gccttttgtttacatgatgatgattatgttgctgtagctaccagtcaaggccttgtagtt
gtttgggaattaaatcaagagcgccgtgggaagcctgaacgaatttatatgtcttcagaa
cacaaaggccgaaaagttacagctctctgttgggatactgctattcttagagtttttgta
ggtgatcatatggggaaagtttctgccatcaaactcaacacgtccaaacaagcaaaggca
gctgctgcctttgtgatgtttcctgttcagacaataatgaccgccgactcctgtgttgtc
cagttagattttttggatggaagactacttatatcttcacttactcgatccttcttgtgt
gacactgagagagaaaaattttggaagattggaaacaaggaaagagatggagaatatgga
gcttgttttttccctggaagatgtagcgcggaccagcaacccttgatatattgtgctcgc
cctggctccaggatgtgggaagtgaactttgatggagaagttatcagtacacatcagttt
aagaaactcctctcatcgccacctctccctgtaattactttaaggacagaacctcagtat
gatcatacagttggatcctgccagtctttgtctttcccaaaactcttgcatcttagtgag
cactgtgtgctgacttggacagaaagaggaatttatattttccttcctcagaatgttcaa
gttcttctttggagtgaagtcaaagatattcaggatgtggctgtctgcaagaatgagctg
ttctgtttgcacctcagtgggaaagtctcacatctttccctgttatctgtggaacgctgt
gtggaacgcctgctaaggaggggcctgtggaacctggccgctcgcacttgctgtcttttc
cagaattctgtcattgccagcagaggaagaaaatctttgactgtagataaattggagcat
ttgaaatctcagctggacctcacaacctgtagtgatctaatttctcagctggaagaattg
atcttaaaatttgaacctttggattcagcttgcagcagtagaagaagctccatttcatcg
catgaaagtttcagcatcttggactctggtatttatcgtatcattagtagtagaagaggc
agtcagtcagatgaagactcttgttcccttcacagccagaccctctcagaggacgagaga
cttaaagaatttgcctcacatcaagaagaggaccaaccagatcagtgttgcggctcacag
ggaaatgaagacaatgtttctcatgttcctgtgacgtttgagacggagaagaatgaaact
tttctcccctttggcattccattaccatttcgttctccgtctcctcttgtgtctcttcag
gctgtcaaggaaagtgtttctagctttgtgcgtaaaactactgagaagattggcaccctt
catacaagccctgatctgaaagtgagaccagaacccaggggtgatgagcagtcatgtgaa
gaggatgtgagtccagtcatctgcccaaaagaggaagacactgaggaagaaaaagaagta
actagtcaacctccagaagaagacaagctccaagagctcagaatagcaacagcagaagca
atgaccaagctagaggacccactggttttatttgaacccaagtctctgagaatggtttta
cagcagtggctttcacagttagaaaaagcgtttgccataaaggatttttcaggcatttca
gatgctggcaactcatccatgacatcgaaccaggatgtgctattgcttgatgagtcgaaa
aagggaatattagatgaagataatgaaaaagaaaaaagggcctctctaagcaatgaggaa
accgtggatcaaacagtgtgtgactctgtaaataacctgagggagcccttggatgacctt
tttcaagtatgttctccatgcagcatagcaaacgatcttcagaaggacctggctgaattg
acaacgttgtgtttggaattgaatgtgttgaattctgagatgaaaagcacaagtgggcat
gcggaccatactttgcaacagtgctctcctgaaactctggcttgtcagttcctaaagaag
tatttttttctcctggacttgacaagagcaaaggagagtatcaagcttagttacactgac
agtccttgtgtttgggatactttcattgaaggattgaaagaaatggccagttgcagtcct
acgtatatggagatgggagaaggagacctgccaacgagattaaagttgctggatgactca
gtccctttcgacagtcctctgttggttgcttatgctgcccgattgtatgagaggtttggg
gaatctgcccttcgatccttaatcaagttttacccatccattttgcctgcggatgtcatg
caactttgtcatcatcatcctgctcagtttttggcttatttagacagtctggtgaaatca
aggcctgaagatcaacggccatccttcctcgagtcccttctacaaccagagtctttaaga
ttggattggctgcttttggcagtgtcccaggatgctcccccaagcaccagcactgtggat
gaggaaggagaccccaggcctcattcacacttgttttcctggggttacagtcagctcatc
cttcatctaattaaactccctgcagattttacaagcaaagagaaaatgactgacatctgt
aggtctcatggtttctggcctggctatcttattctctgtttggagctgcagagaagaaaa
gaggccttcaccaacattgtgtatctgaatgatatgagcctgatggaaggggacagtggt
tggatcccagagactgtggaggaatggaagcttctcctacatctcgtacagaacaagagc
acaaagccagcccctcagaagtcaccaaatgggaacttcaatgatgggccttcccccatc
aatgtggagaacgtggcactcctgttagctaaggccatgggcccggatcgggcctggtca
ctgatacaggaatgtggtttgacccttgagctgtcagagaggtttaccagaacctgcaat
atcctgaggattgctgagaaaaggcagagagccttgatacaaagcatgcttgaaaaatgt
gatcggtttctctggtctcagcaggcctag
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integrated database retrieval system
