Equus caballus (horse): 100071967
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Entry
100071967 CDS
T01058
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100071967 (PRDM1)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100071967 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
Motif
Other DBs
NCBI-GeneID:
100071967
NCBI-ProteinID:
XP_001501874
Ensembl:
ENSECAG00000009044
VGNC:
21811
LinkDB
All DBs
Position
10:57448300..57470605
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AA seq
824 aa
AA seq
DB search
MLDIGLEKRVGTILAAPKCSFSAVRFQELAEGTEGTMKMDMEDADMTLWTEAEFEEKCTY
IVNDHPWDSGADGGTSVQAEASLPRNLLFKHSANSKEVIGVVSKEYIPKGTRFGPLIGEI
YNNDTVPKNANRKYFWRIYSRGELHHFIDGFKEEKSNWMRYVNPAHSAREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQSHPKQQSTEKNELCP
KSVPKREYSVKEILKLDSNPSKGKDFYRSNISPFTSEKDTDDFRKNGSPEVPFYPRVVYP
IRAPLPEDFLKASLAYGMERPTYITHSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGTTV
SPLAPGFQEPRDSYSYLNAPYGTEGLGSYPGYAPPPHLSSAFIPSYNAPYPKFLLPPYGM
NCNGLSTVGNINSINNFGLFPRLYPVYSNFLGGGSLPHPMLNPASLPSSLPSEGARRLLQ
PEHPREVLVPAPHSAFSLTGAAASMKDKACSPTSGSPTAGTAATSEHVVQPKATSVAMAA
PSSDEAMNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGE
RPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQ
CKVCPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHLCSLKVHLKGNCPVAPAAGLPL
EDLTRINEEIEKFDLSDNADRLEDMEDNIDVTSVVEKEILAVVRKEKEETGLKVSLQRNM
GNGLLSGCGLYESSDPSLMKLPHSNPLPLGPVKVKQETVEPMDP
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgttggatattggcttggaaaaacgtgtgggtacgatcttggctgccccgaagtgtagt
ttcagtgctgtgaggtttcaagagttggcagaggggaccgaggggaccatgaaaatggac
atggaggacgcagatatgactctgtggacagaggctgagtttgaagagaagtgtacatac
attgtgaatgaccacccctgggattctggcgctgacggagggacttcggtccaggcagag
gcatccttaccaaggaatctgcttttcaaacattctgcaaacagcaaagaggttattgga
gtggtgagtaaagaatacataccaaagggaacccgttttggacctctaataggtgaaatc
tacaacaatgatacagttcccaagaacgccaacaggaaatatttttggcggatctattcc
agaggggagcttcaccacttcatcgacggctttaaggaggagaagagcaactggatgcgc
tatgtgaatccggcgcactctgcccgggagcaaaacctggctgcgtgtcagaacggaatg
aacatctacttctacaccattaagcctattcctgccaaccaggagcttcttgtgtggtat
tgccgggactttgcggaaaggcttcactacccttatcccggagagctgacaatgatgaat
ctcacacaaacacagagccatcctaagcagcagagcactgagaagaatgaactttgccca
aagagtgtcccaaagagagagtacagcgtgaaagagatcctcaaactggactccaaccct
tccaaaggaaaggacttctaccgttcgaacatttcacccttcacttcagaaaaggacacg
gacgacttcaggaaaaacgggagccccgaggtgcccttctacccacgggtggtctacccg
atccgggcccctctgcctgaagactttttgaaagcttccctggcctatgggatggagagg
ccaacttacatcactcactcacccattccgtcctccacaacaccgagtccgtcagcgaga
agtagccccgaccagagcctcaaaagctccagcccccacagcagcccagggaccacggtg
tcgcccctggctcctggcttccaggagccccgggactcttacagctacttgaacgctccc
tatggcaccgaaggtctgggctcttaccctggctacgcgcctcctccccacctctcatca
gccttcatcccctcctacaatgctccctaccccaagttcctcttacccccctatggcatg
aattgcaatggcctgagcaccgtgggcaacatcaacagcatcaacaactttggcctcttc
ccaaggctgtaccctgtctacagtaacttcctcgggggaggcagcctgcctcaccccatg
ctcaacccagcctcgctcccgagctcgctgccctctgaaggagcccggaggttgcttcag
cccgagcatccccgagaggtgcttgtcccggcgccccacagtgccttctccctcactggg
gccgccgccagcatgaaggacaaggcgtgcagccccaccagtgggtccccgactgcgggc
acagctgccacgtcggagcacgtggtgcagcccaaagctacctcagtggcgatggcagcc
cccagcagtgatgaagccatgaatctcattaaaaacaagagaaacatgactggctacaag
acacttccctaccccctgaagaagcagaatggcaagattaagtatgaatgcaacgtctgt
gccaagactttcggccagctctcgaatctgaaggtccacctcagagtgcacagcggagaa
cggccgttcaaatgtcagacttgcaacaagggctttactcagctcgcccacctacagaaa
cactacctggtacacacgggagaaaagccgcatgagtgccaggtttgccacaagcgattc
agcagcaccagcaatctcaagacccacctgcggcttcactcgggagagaaaccttaccag
tgcaaggtgtgccctgccaagttcacccagtttgtgcacctgaaactccacaagcgcctc
cacacccgggagcgaccccacaagtgtgcccattgccacaagagctacatccatctctgc
agcctcaaggtgcacctaaaggggaactgccctgtggccccggccgcggggctgcctttg
gaagacctgacccggatcaacgaagagatcgaaaagtttgacctcagtgataatgccgac
cggctcgaggacatggaggacaacatcgatgtgacctctgtggtggagaaagagattctg
gctgtggtcagaaaagagaaagaagaaactggcctgaaagtatctttgcaaagaaacatg
gggaatggcctcctctcggggtgtggcctttatgagtcatcagacccgtccctcatgaag
ttgcctcacagcaacccactacctctgggacctgtaaaggtcaaacaagaaacagtcgaa
ccaatggatccttaa
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