Equus caballus (horse): 100072175
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Entry
100072175 CDS
T01058
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecb03041
]
100072175 (DDX1)
03016 Transfer RNA biogenesis [BR:
ecb03016
]
100072175 (DDX1)
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100072175 (DDX1)
Spliceosome [BR:
ecb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100072175 (DDX1)
Transfer RNA biogenesis [BR:
ecb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100072175 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
100072175
NCBI-ProteinID:
XP_001502097
Ensembl:
ENSECAG00000016396
VGNC:
17083
LinkDB
All DBs
Position
15:complement(80110872..80147354)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHIKFSKNGKDLGLAFEIPQHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKALDSYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKDDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAIGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgaaatgggtgttatgcctgagattgcacaagctgtggaagagatg
gattggcttctcccaactgatatccaggctgagtctatcccactgatcctgggaggaggt
gatgtacttatggctgcagaaacaggaagcggaaaaactggtgctttcagtattccagtt
attcagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaagtggcaaatgaatccgtatgacagaggatct
gcttttgcaattgggtcagacggtctttgttgccaaagcagagaagtaaaggaatggcat
ggatgtagagctactaaaggattaacgaaagggaaacactactatgaagtatcctgtcat
gaccaagggttatgcagagttgggtggtcttccatgcaggcttccttagacctaggtact
gacaagtttggatttggctttggtggaacaggaaagaaatcccataataaacaatttgat
aattatggcgaggaattcactatgcatgataccattggatgctatctagatatagataaa
ggacatatcaaattctccaaaaatgggaaagaccttggtctggcatttgaaataccacaa
catatgaagaaccaagctctctttcctgcctgtgttttgaagaatgctgaactaaaattt
aactttggtgaagaagagtttaagtttccaccaaaagatggttttgttgctctttccaag
gcattggacagttacgttgtcaaatcgcagcacacaggtaatgcacaggtggcacaaaca
aagtttctccccaacgctccaaaagctctcattgttgaaccctcccgagagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatatattgataatcctaaactgagggag
cttctgataattggaggtgttgcagcacgggatcagctctctgttttggataatggggta
gatatagtcgttggcactccgggaagactagatgatttggtgtcaactggaaagctgaac
ttatcccaagttagattcctggtcctggatgaagctgatgggcttctttctcagggttat
tccgatttcattaataggattcacaatcagattcctcagatcacctctgatggaaagaga
cttcaggtgattgtttgctctgctactttacattcttttgatgtaaagaaactgtctgag
aagataatgcattttcccacgtgggttgatttaaaaggagaagattctgttccagatact
gtacaccatgttgttgtcccagtgaatcctaaaactgacagactctgggaaaggcttgga
aaaaaccacattagaactgatgaagtacatgcgaaagataacacaagacctggtgctaac
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattattttttgtagaaccaaaattgactgtgat
aacttggagcagtattttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggtgacaggaaacctcatgagaggaagcaaaacttggaaagg
tttaagaaaggagatgtaagattcttgatttgcacagatgtagccgccagaggaattgat
atccatggtgttccttatgttataaatgtcaccttgccggatgaaaagcaaaactacgta
catcgaattggcagagtgggaagagctgaaaggatgggtctggctatttccctggtggca
acagaaaaagagaaggtttggtaccatgtgtgtagcagccgtggaaaagggtgctataac
acgagactcaaggatgatggcggctgcaccatatggtacaatgagatgcagttgctgtct
gagatagaagaacacctgaactgtaccatttctcaggtcgagccagatataaaggtaccc
gtggatgaatttgatgggaaagttacctatggtcaaaaaagggccattggaggtggaaac
tataaaggccatgtggatattttggcacctacagttcaagagttggctgcccttgaaaag
gaggcacagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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