Equus caballus (horse): 100072388
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Entry
100072388 CDS
T01058
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ecb
Equus caballus (horse)
Pathway
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100072388 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecb03041
]
100072388 (PRPF8)
Spliceosome [BR:
ecb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100072388 (PRPF8)
Complex C
U5 SnRNP specific factors
100072388 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
100072388
NCBI-ProteinID:
XP_001504382
Ensembl:
ENSECAG00000021318
VGNC:
21891
UniProt:
F6RNK0
LinkDB
All DBs
Position
11:complement(45651802..45678702)
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AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccgtaccgagggccgggtaacccggttcccggccctctagccccg
ctgccggactacatgtcggaggagaagctgcaggagaaagcccgaaaatggcagcaattg
caagccaagcgctatgcagaaaagcggaagtttggatttgtggatgctcagaaggaagac
atgcccccggaacatgtcaggaagatcattcgagaccacggagacatgaccaacaggaag
tttcgccatgacaaaagggtctacttgggcgccctgaagtacatgcctcacgcagtcctc
aagctcctggagaacatgcctatgccttgggaacagattcgggatgtgcctgtgctgtac
cacatcactggagctatttcctttgtcaatgagattccctgggtcattgagcctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgac
aacatcctagatgttgagccactggaggccattcagctagaactggaccctgaggaggat
gcgcccgtgttggactggttttatgaccaccagccattgagggacagccggaagtatgtg
aatggttccacttaccagcgctggcagttcacactgcctatgatgtccactctctaccgc
ctggccaatcagctcctgacagacttggtagatgacaattacttctatttgtttgatctg
aaggccttttttacttctaaggcgctcaacatggccattcctggaggccccaaatttgaa
cctcttgttcgagatatcaatcttcaggatgaagactggaatgagttcaatgatattaac
aagatcatcatccggcagcctatccgcactgaatacaagattgcttttccttacttgtac
aacaaccttccacatcatgtccacctcacctggtaccacacacctaatgttgtgtttatc
aaaacggaggatcctgatttgccagctttctactttgatcctttgatcaacccaatttcc
cataggcactccgttaagagccaggaaccattgccggatgatgatgaggagtttgagctt
ccagaatttgtggagcctttcctgaaggacacacccctctacacagacaatacagccaat
ggcattgccctgctgtgggccccacggcccttcaacctccgctctggtcgcacccgtcgg
gccctggacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcagccc
gtgaaagtgagagtctcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcccaaaagaagaggtatctgttccgctccttcaaagccaccaaa
ttctttcagtccacgaagctggactgggtggaggtggggttgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcatcgtaaaaacctcaactatctgcacctggattac
aacttcaacctcaaacctgtcaagacgctcaccaccaaggaaagaaagaaatctcgtttt
gggaatgctttccacctgtgtcgagaagttttgcgtttaactaagctggtggtggacagt
cacgtgcagtatcgattgggcaatgtggatgctttccagctggcggatgggttgcagtac
atctttgcccatgtggggcagctgacgggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggtcct
gtagggaagggtcctggctgtggcttctgggctgctggctggcgagtctggctctttttc
atgcgtggtatcacccctttgctggaacgatggctgggcaacctcctggcccggcagttt
gaaggccgacattctaagggggtggcaaagactgtaacaaagcaacgagtggaatctcat
tttgaccttgagcttcgggcagctgtcatgcatgacattctggacatgatgcctgagggg
atcaaacagaacaaggcccggacaatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtccctgggctgccaacacccatagagaatatgatcctt
cgatatgtgaaggccaaggctgactggtggaccaatactgcacattacaaccgagaacgg
atccgccgtggggccactgtggataagactgtttgcaaaaagaacctgggccgcctcacc
cggctttacctgaaggcagaacaagagcggcagcacaactacttgaaggatgggccttac
atcacagcagaggaagcagtggcagtgtatactaccactgtgcattggttggaaagccgt
aggttctcacccattccattccccccgctttcatacaagcatgacaccaagttgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaggagctgggtctgattgagcaagcctacgacaatccccacgaggcattgtcccgc
atcaagcgtcaccttctcacgcagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacttggtgccagtgtatgatgtggagccactggagaagataactgacgcc
tatctggaccagtacctgtggtatgaagctgacaaacgccgtcttttcccaccctggatc
aagcctgctgacacagaaccaccacctcttcttgtttacaagtggtgccaaggcatcaat
aatctgcaggacgtgtgggagacaagtgagggcgagtgcaacgtcatgctagaatcacgc
tttgagaagatgtatgaaaagatcgacttgaccctgcttaataggctgctgcgactcatt
gtggaccacaacatagctgactacatgacagccaagaacaacgtcgtcatcaactataag
gacatgaaccatacgaattcatatgggatcatcagaggcctgcagtttgcctcgttcatt
gtgcagtactatggcctggtgatggatttgcttgtgttgggattgcatcgggccagtgag
atggctggaccccctcagatgccaaatgactttctcagtttccaggacatagccaccgag
gctgcccaccccatccgtctcttctgcagatacattgatcgcattcatattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcaccctgacccc
aacaatgaaaacatcgttggctataataacaagaagtgctggccccgggatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacggtcagtgactaccgttcagtgggagaacagcttcgtgtcagtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggctttgagtgtcgcatcctacctaaatgc
cgcaccagctatgaggagttcacccacaaagatggggtctggaacctacagaatgaggtt
accaaggagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaacaccgctctcattggtcttatgacgtactttcgagaggctgtggtgaac
acccaggaactcctggacttgctggtgaagtgtgagaacaagatccagacacgtatcaag
attggcctcaactccaagatgccgagtcggttccctcctgttgtgttctacactcctaag
gagttggggggactcggcatgctctcaatgggccatgtgctcatccctcagtctgacctc
aggtggtccaagcagacagatgtaggtattacacactttcgttctggaatgagccatgaa
gaagaccagctgattcccaacttgtaccgctatatacaaccatgggagagtgagttcatt
gattctcagcgggtctgggccgagtatgcacttaagagacaagaggccattgctcagaac
agacgattgaccttagaagatctagaagattcatgggatcgtggcattcctcgaattaat
actctcttccagaaggaccgacacaccctggcttatgataagggctggcgtgttcggact
gactttaagcagtaccaggttttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtacagacatgatccaggccctgggtggt
gtagaaggcatcctggagcacacgctcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcaccctctggtggtcccca
accatcaaccgagccaacgtatacgtaggctttcaggtgcagctggacctgacaggtatc
ttcatgcatggcaagatccccaccctgaagatctctctcatccagatcttccgagctcac
ttgtggcagaagatccacgagagcatcgttatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactggaaattgagacagtgcaaaaggagacaatccacccccgaaagtcctat
aagatgaattcctcctgtgcagatatcctgctctttgcctcctacaagtggaatgtttcc
cggccatcattgctggcagactccaaggatgtgatggacagcaccaccactcagaagtat
tggattgacatccagttgcgctggggggactatgattcccatgacattgagcgctacgcc
cgggccaagttcctggactacactacagacaacatgagtatctacccttcacccacaggt
gtgctcattgccattgacctggcctataacctacacagtgcctatggaaactggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgcaagggcctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaactatggtgagctcttctccaaccagattatctggttcgtg
gacgacactaatgtctacagagtgactatccacaagacttttgaagggaacttgacaacc
aagcccatcaatggggccatcttcatcttcaacccacgcacaggacagctgttcctcaag
ataatccacacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag
acagctgaggaggtggctgccctgatccgatctctgcctgtggaggagcagcccaagcag
attattgtcaccaggaagggcatgctggatccattggaggtgcacttgctggacttcccc
aatatcgtgatcaaaggatcagagctccaactgcctttccaggcttgcctcaaggtggaa
aagtttggggatctcatccttaaagccactgagccccagatggttctctttaacctctat
gatgactggctcaagactatttcatcttacacggctttctcccgccttatcctgattctg
cgtgccctgcatgtgaacaatgaccgggcaaaggtgatcctgaagccagacaagactact
attacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaggatcttatcttggctgactacggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaattcgagacatcatcctgggtatggagatctcagcaccgtca
cagcagcggcagcagatagctgagattgagaagcagaccaaggagcagtcacagctgact
gcaacacagactcgcactgtcaacaagcatggtgacgaaatcatcacctctaccaccagc
aactatgagacccagactttctcatctaagaccgaatggagggtcagggccatctctgcc
gccaacctgcacctaaggaccaatcacatctatgtttcatctgatgacatcaaggagact
ggttatacctatatccttcccaagaatgtccttaagaaattcatctgcatatctgatctt
cgggcccaaattgcaggatacctgtatggagtgagcccaccggataacccccaggtgaag
gagatccgctgcattgtgatggtgccacagtggggcactcaccagaccgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgagtccccccagctatcaccccaggatgtgaccacccatgccaagatcatg
gctgacaacccatcttgggatggcgaaaagaccattatcatcacctgcagcttcacacca
ggctcctgcacactgacagcctacaagctgacccccagtggctatgaatggggccgccag
aacacagacaagggcaacaaccccaagggctacctaccctcgcactacgagagagtccag
atgctgttgtcagatcgtttcctcggcttctttatggtccctgcccagtcctcgtggaac
tacaactttatgggtgtccggcatgaccccaacatgaagtacgagctgcagctggcaaat
cccaaagagttctaccatgaggtgcacagaccctcccacttcctcaactttgccctcctg
caggagggtgaggtctactctgccgaccgagaggacctctatgcctag
DBGET
integrated database retrieval system
