Equus caballus (horse): 100072442
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Entry
100072442 CDS
T01058
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ecb
Equus caballus (horse)
Pathway
ecb05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100072442 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100072442 (JMJD1C)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100072442 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
100072442
NCBI-ProteinID:
XP_023499566
Ensembl:
ENSECAG00000012941
VGNC:
19222
LinkDB
All DBs
Position
1:complement(52677730..53023906)
Genome browser
AA seq
2360 aa
AA seq
DB search
MQGPYSLNGYRVKVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRASQNSNVVHSHYTRARANSPRPAMNSQAAVPKQNTHQ
QQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKNKQLMNKRRKPEEDEKKL
NMKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPETELKNKNTSKINGEEGKSQNNEKA
GEETPIDSQPPWDQIQEEKKHEEAEKQKSVDSQLQGKMIIHSSEQATLSDHNPNDLLLQE
CNMEKTHTVELLPKEKFISRPPTPKCVIDITNDTNLEKVAQENSSTFGIQTLQKMDSSVS
DSKHSIANTKYLETAKRDSDQSWVSDVVKVDLTQSNVRNACSGNDHLNMEKEKNQYVSYM
SSLNTVSVMEDKLHKRSPPPETIKSKLNTSVDAHKTKSNPSPEAIKPKITHSPDSVKTKA
TYVNSQAAVERRLASKIEHELSRCSFHPVPIRGTTLETTKSPLIIDKNEHFTVYRDPALI
GSETGGNHISPFLNQHPFPLHSSSHRTCLNPGTHHPALSPAPHLLAGSSSQTPLPTINTH
PLTSGPHHSVHHPHLLPTVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQ
SPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAESSLRRNS
PSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKTLVDHHKEELER
KAFIEPLRSVASTSVKNDLDLNRSQTGKDSHLHRHFVDPVLNQLQRPSQETGERVNKYKE
EHRRILQESIDVAPFTTKIKGLEGERENYSRVAASSSSPKSHVIKQDKDVECSVSDLYKM
KHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQSNTLAAAANPQTLTSFIS
SLSKPPPLIKHQPESEGLVGKIPEHLSHQIASHSVTTFRNDCNRSPTHLSVSSTNTLRSM
PALHRAPVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDS
QGNFKSSEKSLTEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSSTKVDGMPAM
QLASKDRVSERSSTGANQTDCLKPAEAGEAGRIILPSVNSDSAHIKSEKNFQAVSQGSIP
SSVMSAVNIMCNTETDVCTSAATTTSVSSWGGSEIIYSLSNTVLASKSLECTSSKAVSHS
VSQTQECKVSTTAPVTPSSSKTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSE
TEPNALKNQTSSASLLLDSTVVCSTINKANSVGNGQVSQTSQPNYHTKLKKAWLTRHSEE
DKNTNKTENSGNSVSEIIKPCSVNLIASTSNDIQNSVDSKIIVDKYIKDDKINRRKAKRT
YESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKAEIEEDLKPNGVLSRSAKEK
SKLKLQSNSNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSK
KGEEPSHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDIE
TSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVC
QKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAM
HTLREKYGIKSHCHCTNKQNVQVGNFPTMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQ
KSESNGNSSPASDISTDSKLTPPESQSPLHWLADLAEQKAREEKKENKDLALEKQIKEEG
EQDNPDSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPSGK
TGRTMPNILDDIIASVVENKIPPNKASKINVKPELKEEPKESRKSAMDENNKLYSDIPHS
WICEKHILWLKDYKNINNWKLFREFWKHGQPAVVSGVHKKMNTSLWKAESISLDFGDHQA
DLLNCKDSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMPARYED
LLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEVS
DVVNILVYVGIAKGNGVLSKTGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDID
KIREFLQKISKEQGLEVLPEHDPIRDQSWYVNRKLRQRLLEEYGVRTCTLIQFLGDAVVL
PAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAV
KEMVRSLKIHEDELEDMEEN
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattccttaaatggatacagagtgaaggtatatagacaagactctgcc
acccagtggtttactggcataattactcatcatgatctcttcactcgcaccatgatcgtt
atgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgttgttcactctttattaaaaggtgaaaatattggcattacatcacggcga
aggtctcgtgccagtcaaaatagcaacgttgttcacagtcattatacacgtgcccgagca
aatagtcccagaccagcaatgaactctcaagctgctgtaccaaaacagaatacacaccag
caacagcaacaaagaaatatccgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaggaggaaaaatatgattatatagcacgaggagaaaatcctaaa
ggtaaaaacaaacagttgatgaataaaagaaggaaacctgaagaggatgaaaagaaacta
aatatgaaaagactacgaactgacaatgtttcagacttttctgagagtagtgactcagaa
aattcaaataagagaataataaataattcctcagagcagaagccagagactgagttgaaa
aataaaaacacttcaaagataaatggagaagaaggaaaatcccagaataatgagaaggca
ggagaagagacaccaatagatagccagcctccctgggatcaaatacaggaagaaaaaaaa
cacgaagaagcagaaaagcagaagtctgttgactctcagcttcaaggaaaaatgattatc
cactcatcagaacaggccacactttctgatcataatcccaatgatttacttcttcaggaa
tgcaatatggaaaaaacacatacagtggaattgttaccaaaggagaagttcatatccaga
ccacccacaccaaaatgtgttattgatattacgaatgacactaatttggaaaaggtagct
caggaaaactcaagcacatttggcattcagacgcttcagaaaatggattctagtgttagt
gattcaaaacattcaattgcaaatacaaaatacttagaaacagcaaaacgagattctgac
cagagctgggtcagtgatgtagtcaaagtagatttaacccaatcaaatgttaggaatgct
tgttcaggaaatgatcacctgaatatggaaaaagagaaaaatcaatatgtctcttacatg
tcttctctaaacacagtttctgtcatggaagataagctgcataagcgaagtccgccccca
gagactataaaatctaaacttaatacttcagtagatgctcacaagacaaaatctaatcca
tcacctgaagctattaaacctaaaattacccattctcctgattctgtaaagactaaagcc
acttatgtgaacagccaagctgctgttgaaagaagactggcaagtaagatagaacatgag
ttatcaagatgcagttttcatccagttcctattcgaggcactacattggaaactacaaag
agccctcttatcattgataaaaatgagcatttcacagtttacagagatcctgcgcttatt
gggtcagaaacaggaggtaatcacatttcacctttcttaaaccagcatccttttcctctt
cattcttcatcccatagaacctgtttaaatccaggtacccatcaccctgccttaagtcct
gcaccccacttactggccggatcatccagtcaaactccattacctaccattaacactcac
cctctgactagtggtccacaccattctgttcatcaccctcatttacttcctactgtgtta
cctggagtgcctactgcctccttacttggtggccacccacgactagagactgctcatgcc
agcagcttgagccacttagcactagcacaccagcaacagcaacagttgttacagcaccag
tcacctcatcttcttggacaagcccatccttctgcttcatataatcagcttggactttat
ccaattatttggcaatatccaaatggaacacatgcgtactcaggacttggtctaccttct
tctaagtgggttcacccagaaaatgcagttaatgctgaatcttcattaaggaggaattct
cccagtccttggttacatcaaccaacccctgtgacctcagcagatggtattggattactt
agtcacattcctgtcagaccctccagtgcagagcctcatcggcctcttaaaattacagcg
cattccagtccaccattgacaaaaactttagtagatcatcataaagaagaattggagagg
aaagcctttattgaaccgttacgttctgttgcgtccacatcagtgaaaaacgacctggat
ctaaataggtcacagactggaaaagatagtcatttgcataggcattttgtggatcctgta
ttgaatcaattgcagagaccatcccaggagactggagagagagtaaacaaatataaggag
gaacaccgtcgaattcttcaagaaagtattgatgttgctccctttacaactaaaatcaag
ggccttgagggtgagagagagaattattccagagtagcagcatcatcttctagccctaaa
agccatgtcatcaaacaagacaaagatgtggaatgctcagtatcagatctttataaaatg
aagcactcagtgcctcagagtttaccccaaagtaactatttcacaacactgtctaatagt
gtggtcaatgaaccaccaaggtcctacccatccaaagaggtttcaaatatttacactgaa
aagcagagtaatacccttgctgcagcagctaatcctcaaactctgacttcatttatatcg
tctctttcaaagcctccacctttaattaaacaccaaccagaaagtgaaggtttagtaggc
aagataccagaacatctttcccatcaaattgcttctcactcagtaacaaccttcagaaat
gattgtaatagaagtcctacccatttgtcagtttcttctacaaatacactccggagcatg
cctgctttacatagagcaccagtatttcacccaccaatccatcacagcctggaaagaaag
gaaagcagctatagtagcctttcccctccaactttaactccagtgatgcctgtaaatgct
ggtgggaaagttcaagaatcacaaaagcctccaactctaattcctgagccaaaagactct
cagggaaattttaagagttctgaaaagagtttgacagaaatgtggaaatctaataataac
ctcagcaaagagaaagctgaatggcatgtggagaaaagcagcggaaagtcacaggctgct
atggcatctgtcattgtacgtccaccttctagtacaaaagttgatggcatgccagcaatg
cagttagcttccaaagatcgagttagtgaacgatcttcaactggggcaaatcaaacagat
tgcctgaaaccagcagaagctggagaggctggaagaatcattctgccaagtgtgaattca
gacagtgctcatataaaatctgaaaaaaactttcaggctgtctcacagggcagtattccc
agttcagtcatgtctgctgtaaatataatgtgtaatactgaaacggatgtatgcacatct
gctgccactaccaccagtgtttccagctggggtggttcagaaataatttactctttatca
aatactgttttggcctctaaatctttagaatgtacctcttcaaaagctgtcagtcattca
gtgtctcaaacacaagaatgcaaggtcagcaccacagctccagttacaccatccagtagt
aagacaggaagtgctgttcagcccagctctgggttctcaggcacaactgattttatccat
ttaaaaaagcacaaggcagcattggctgcagctcagtataaaagtagtaatgtcagtgag
actgagcctaatgctttgaaaaatcagacatcttcagcctcccttctcttggatagcact
gtagtctgtagtacaataaacaaagctaactctgtaggaaatgggcaagtgtcccagaca
agtcaaccaaactaccatactaaactgaaaaaggcctggcttactagacattcagaggaa
gataaaaatactaataaaacggaaaattcagggaattctgtatcagaaattattaagcca
tgttctgtcaatttaatagcctctacatctaatgatatacaaaacagtgtagatagtaag
atcatagttgataaatacataaaagatgataaaatcaatcggagaaaagccaaaagaact
tatgaatctgggtctgaaagtggagactcggatgaaagtgaaagcaagtcagagcaaagg
actaaaaggcaacctaagccaacttacaaaaagaagcaaaatgatttgcagaagagaaaa
gctgaaatagaagaagatttaaaacccaatggggttctcagcaggagtgccaaagaaaaa
agtaaattgaagttgcagagcaatagtaatagtgctggcatccctcgttcggtattaaaa
gattggcgtaaagtcaagaagctgaagcaaactggggaatcctttttacaggatgactcc
tgctgtgagatagggcctaatttgcaaaagtgccgggaatgtagacttatccggagtaaa
aaaggagaagaaccaagtcactcaccagtattttgtagattttactactttagacgattg
tcatttagtaaaaatggagtggttagaatagatggtttctcttctcctgaccaatatgat
gatgaagctatgagtttatggacacatgaaaattatgaagatgatgaactagacatagaa
acttcaaaatacatcttggatataataggtgataagttctgtcaattagtaacatctgaa
aaaacagctttgtcctgggtgaagaaggatgccaaaattgcctggaaaagagcagtaaga
ggagtccgggagatgtgtgatgcatgtgaagcaacgttgtttaacattcattgggtctgc
caaaaatgtggatttgtggtctgcttagattgttacaaggcaaaggaaagaaagagttct
agagataaagaactatatgcttggatgaagtgtgtgaagggacagcctcatgatcacaaa
catttaatgccaactcaaattatccctggttctgttttgacagatcttctagatgcgatg
cacactcttagagaaaaatatggtataaaatcccattgtcactgtactaacaaacagaat
gtacaagttggaaattttcctacaatgaatggcgtgtctcaagttttacagaatgttctt
aatcacagtaataaaatttctctgtgcatgcctgagtctcagcagcaaaatacccctcag
aagtctgagagtaatggcaacagcagcccagcgagtgatataagcacagacagcaagtta
actcctccagaatcccaatcaccactgcactggttagcagatcttgcagagcaaaaagcc
agagaggaaaaaaaagaaaacaaagaccttgcccttgaaaagcaaattaaagaagaggga
gaacaagacaaccctgattctccgaacagcagaacgtcacctcctgtgtcccagaataat
gaacaaggctcaaccttacgggatttgctgaccacaacagctggcaagcttcgtgtgggt
tccacagatgctggcattgcctttgcaccagtgtattcgatgggaaccccaagtggtaaa
actggaaggactatgccaaacattcttgatgacataattgcttcggttgttgaaaacaaa
attccaccaaataaagcctctaagataaatgtgaaaccagagcttaaagaagagcctaaa
gagagcagaaaatctgccatggatgaaaacaataaattatacagtgatataccacattct
tggatctgtgagaagcatattctgtggcttaaggactataaaaatattaataattggaag
cttttcagagagttttggaaacatggacaacctgcagtggtttctggtgtgcataagaaa
atgaacactagcttgtggaaggcggaatcaattagtcttgattttggagaccaccaagct
gatctcttgaactgcaaagacagcattatttcaaatgccaatgttaaggaattctgggat
ggttttgaagaagtttcaaaacggcaaaaaacaaaaagtggagaaacagttgttttaaaa
ttgaaagactgcccttcaggagaagacttcaagactatgatgccagcaagatatgaagat
cttttaaaaagcctgccattgccagaatattgtaatccagaaggaaaattcaatttggcc
tctcacttgccaggattttttgtacgccccgatctaggacccaggttgtgcagtgcctat
ggtgtagctgctgctaaagatcatgatataggaacaacaaatctccatgttgaagtttct
gatgttgtaaatattctagtctatgttggcatagcaaaaggaaatggcgttctctcaaaa
acaggaatactcaagaaatttgaggaagaagatttggatgacattttaagaaaacggttg
aaggactcaagtgaaatacctggtgctctgtggcatatttatgctgggaaagacattgac
aagataagggaatttcttcagaagatttcaaaggaacaaggccttgaagttctaccagaa
catgatccaatacgtgaccaaagttggtatgtgaacagaaagctccgccaaagactgctt
gaggaatatggagtcagaacctgcaccctgattcagttccttggcgatgctgttgtctta
ccagcgggagcacttcatcaggtacagaattttcacagctgtattcaggtaaccgaagac
tttgtgtctccagaacatcttgtacagtcatttcatttaacacaggaactgagacttttg
aaggaagaaatcaattatgatgataaactacaggttaaaaatatcttgtatcatgcagtc
aaggaaatggtgagatctttgaagatacatgaagatgaattagaggatatggaagaaaat
tag
DBGET
integrated database retrieval system
