Equus caballus (horse): 100073136
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Entry
100073136 CDS
T01058
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein isoform X1
KO
K10266
F-box and WD-40 domain protein 10
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecb04121
]
100073136 (CDRT1)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100073136 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_Vps41
F-box
Beta-prop_IP5PC_F
F-box-like
Beta-prop_WDR11_2nd
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
100073136
NCBI-ProteinID:
XP_014584337
UniProt:
F6TWN2
LinkDB
All DBs
Position
11:complement(57773329..57810487)
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AA seq
1082 aa
AA seq
DB search
MENLESRLKNALYFRCERGSDFVPVCQKCETCVLAWKVFSTKEWFRRIGEMSQRRFLVSI
LEQLDSLYLLHYFQNILQATQGKDFICNRSRINLNKEGKIVKSSLNQMLDKTVEEKMREI
LCWFGNSTHRTKANYTLLLLQMCDPKLLLAAADVIRVLFLREQNNISGLNQDFNNVLFFP
EKDYNLQSETSRVYWAARTRHTSFPLSKASGKKSSPENVVGGATKTGQWKNSIQFISEMN
RLFSGKADMPKAECASADLLVDLDAVRDLCSGVSKYRDFIRHLPIHLSKYILSILDKNTL
NRCASVSQHWAALVQQVKMDLSMHTFIQNQITFLQGSYTKGIDPNYANKVSIPVPKEAED
GKRTRVKNPKLKLRTKNDYNLWAAYQNQETQQVLMEERNVFCGTYNIRILSDTWDRSRVI
HYSGRDLVAVSSNRKIHLLDIIQVKEMPVEFRGHAGSIHALFLCEEENFLLSGSYDLSIR
YWDLKSGACLRIFNGHQGTITCIDVYKNRLVSGARDCQVKEWDVETGKCLKTFKHKDPIL
AIKINDTYIVSSCERGVVKVWHAVTAQPIKTLNGHEGAVKCLFFDDWHLLSGSTDGLVMA
WSMVGKYERCLMAFKHPKEVLHVALLFLRVISACADGKIRIYNFLNGNCLKVMKANGRGD
PVLSFFIQGNRMVINTERNILLFQFEHVKWQYSLERAKQKKNKDKEEDREENGFTDVPSR
SSTQVYSLKDSVSSKQIVAQESLTSKPHRSRVLLRAAKLPTAVLTEASQSQGKPKSARGD
GKKRASPASEEANSTDGGQETLEAKSPPGDNVEKVQKQGQLKAPADLINYPKKKSWPIPM
SPDRFLLTVNALQQAHNSGEFAYPRRPQTQIIDAWGPSISHPRKVLSFKGKSVQQAVDRL
RFSNPPIDVKRTNIPLEIQKLQPNLKNSLHSPRVQSTIPQPMIIRSRFTGRLKGEDQATS
LVDGTVHSFRPLTSMQVIKPNCMLASPVGMTTQSVKKERPRFCTTLNPFRVNTEFMLLTV
KEEKEHREAKMKEYQARTPTEVVNLEKASKAAWIRKIKGLPIDNFMKQGKTAAPELGQNI
FI
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctggaatcaaggctcaagaatgccctctattttcgttgtgagaggggaagc
gattttgtccccgtgtgccaaaagtgtgaaacgtgtgtcttggcttggaaggtcttctct
accaaagagtggttccgaaggattggggagatgtcccagaggaggtttctagttagcatc
ctggagcagttagacagcctgtatttgttacactattttcaaaacatccttcaggccaca
caggggaaggatttcatctgtaacaggtcccggatcaacctcaacaaggagggtaaaatc
gtgaagtcctccctgaaccaaatgttggataaaacagtagaagagaagatgagggagatt
ttgtgctggtttgggaacagcacccaccggactaaggccaattacacactcctgctgctt
cagatgtgtgaccccaagttactgcttgctgctgccgatgtcatcagagtcctgtttctg
agagagcagaacaacatctcaggcctcaatcaagacttcaacaatgtgcttttcttcccc
gagaaagactacaacctccagtctgagacctcacgtgtctactgggcagccagaaccagg
cacacatccttccctttgtccaaagcttcagggaaaaaaagctcgcctgaaaatgtggtg
ggaggtgcaactaagactggacaatggaagaattccatccagtttatttccgagatgaat
aggctgttttctggaaaagcagacatgcccaaggcagagtgcgcctccgccgatctgttg
gttgacctggatgctgtcagagacctgtgttctggggtcagcaaatatcgggacttcatc
cgtcacctgcccatccacctctccaagtatattctaagtatactggataaaaacacctta
aacaggtgtgcctctgtgagccagcactgggctgcactggtacagcaggtcaagatggac
ctgtcaatgcacacattcattcagaaccagattacctttttgcaggggtcctacacaaag
ggaatagatcctaattatgccaacaaagtttctatcccggttcctaaagaggcagaagac
ggaaagcgcacgcgtgtgaaaaatccaaaattgaaactgagaacaaagaatgactacaac
ctgtgggctgcataccagaaccaggaaacccagcaggtcctgatggaggagagaaatgtc
ttctgtggaacttacaatatccgtattctctctgacacgtgggaccgaagcagagtcatt
cactattctgggagagatttggtagctgtgtcatccaatcggaagatccaccttctggac
atcatacaagtaaaggagatgcccgttgagttccgaggccatgctgggagtatccacgcc
ctcttcttgtgtgaggaggaaaactttcttctgagcgggagttatgacctgagcatccga
tactgggatctgaaaagtggggcttgcctacgaatcttcaatggtcaccaggggacaatc
acttgcatagatgtatataagaacaggctcgtatctggagcaagagattgccaggtgaaa
gagtgggatgtagagacagggaaatgcctaaagacatttaaacacaaagaccccatcttg
gccatcaagatcaatgacacctacatcgtgagcagctgtgagcgaggggtagtcaaagtg
tggcatgctgtcactgcccagccgataaagactctcaatggccatgagggagctgtgaaa
tgtctcttctttgacgactggcatctcctctcgggaagtactgatggcctggtcatggcc
tggagcatggtgggaaaatatgagcgatgcctcatggccttcaaacatccaaaggaggtg
ctccatgtggcccttctcttcctccgggtcatcagtgcctgtgcagatggcaagatccgc
atttacaatttcctaaatgggaactgtctgaaggtgatgaaagccaatggcagaggtgat
cctgtgctgtccttctttattcagggcaacaggatggtgatcaacacggaaaggaacatt
ctcctgttccagtttgagcatgtaaagtggcagtactcccttgaacgagccaaacaaaag
aagaacaaggataaagaggaagacagggaagaaaatggcttcacagatgttccctccagg
tctagcactcaggtttacagcctgaaggactccgtgtccagtaaacaaatcgtggcccag
gagtccctcacaagtaaacctcacaggtcccgcgttctcctgagggcagccaagttacct
acagcagttttaacagaggcatctcaaagtcaaggaaagccaaaatcagcccgaggagat
ggcaagaagagagcaagtcctgcttccgaggaagcaaacagcacggatggtgggcaagag
actttggaagcaaaatctcctccaggagataatgtggagaaagtacaaaaacaaggacaa
ctgaaagctcctgcagacttgataaattacccaaagaaaaagtcctggcccatccctatg
tcgcccgaccggttcctcctgacagttaacgccctacaacaagcccataattcaggggag
tttgcctatccccggaggccccaaacccaaatcattgatgcctggggaccttcaatttca
cacccaagaaaggtcctgagtttcaaaggaaaatcagtccaacaagcagttgatcggctg
agattcagcaaccctcccatagatgtcaaacgaactaacattccccttgaaatccagaaa
ctgcagcccaacctgaagaactctttgcacagtcccagagtgcagtccaccataccccag
cccatgattatccgttccagattcactggcaggctaaagggtgaagaccaagcgaccagt
ttggttgatgggacagtgcacagctttcgtcccttaactagtatgcaggtcattaaaccg
aactgcatgctggcttcaccagtgggcatgacaacccagtctgtcaagaaagaaaggcct
cgcttctgcacaaccctcaatccctttagagtgaacactgagttcatgttgttaactgtg
aaggaggagaaagagcacagggaagccaagatgaaggagtaccaggccagaacgcccact
gaagtggtcaatctagaaaaagccagtaaagctgcatggatcaggaagatcaaaggcctg
cctatagataatttcatgaagcaagggaaaacagcagcccctgaacttggacaaaacata
tttatctga
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