Equus caballus (horse): 100073159
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Entry
100073159 CDS
T01058
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
ecb05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100073159 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100073159 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100073159 (HBS1L)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100073159 (HBS1L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
Motif
Other DBs
NCBI-GeneID:
100073159
NCBI-ProteinID:
XP_014590931
VGNC:
51035
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All DBs
Position
10:complement(81941520..82019631)
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AA seq
687 aa
AA seq
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MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDSPSVGEPVEEYDYE
DLKEPSSALLNRQLSGVDQARLYSCLDHMREVFGDDVPDDVLIEAVLKSKFDVQKALSMV
LEQDSLQNLKVKSQGAVSAGKIAKGKSIDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTAEENGHSFHTPQKGLLSEDASNAAASDVPETVSRSALPSHAIQAAEEQSSVPAPVKK
PSRLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRIMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMIT
GAAQADVAVLVVDASRGGFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSF
KPPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPREPIKACTRFRARILIFNIEIPVTKG
FPVLLHYQTVSEPAVIKRLISILNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYK
DFKELGRFMLRYGGTTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgacgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgactattgtatttcaccatcaacagctgctcagttt
atatactcacgacgcgacagcccttcagttggtgagccggtggaagaatatgattatgag
gacctgaaagagccctccagtgcactgttgaaccgtcagctaagtggagttgatcaagct
cgtctttattcatgccttgatcacatgagagaggtatttggagatgatgtgccagacgac
gtattgattgaagcagttctgaagagcaagtttgacgtgcagaaggctttgtcaatggtt
ctggagcaagacagcctgcagaatttgaaggtgaagagtcagggagcagtatctgcagga
aagatagctaaaggaaaatcaatagattcccagtcatctcgaagtgaatctgaaattgtg
ccaaaagttgctaaaatgactgtgtctggaaagaagcagactatgggatttgaagtgcct
ggagtaactgctgaagaaaatggtcatagtttccacacacctcagaaagggcttcttagt
gaagatgccagcaatgctgctgcttctgatgttcctgagaccgtttctagatcagctctt
ccatcccacgccattcaagcagcagaagagcagagttcagtaccagcaccagtgaaaaag
cccagcaggctgaggcagcaaatcgatgtcaaggctgaactggagaagcggcaaggaggg
aagcagctcctcaacctggtggtcattggtcatgttgatgctgggaaaagtactctgatg
ggccatatgctttatcttctgggtaatgtaaacaaaagaattatgcataagtatgaacag
gagtctaaaaaggctggcaaagcttcgtttgcgtacgcatgggtcttggatgagactgga
gaagagagggaaaggggagtgacaatggatgttggtatgacaaagtttgagactacaacc
aaagttattacattaatggatgctccaggccataaggatttcattccaaatatgattaca
ggagcagcccaggcagacgtagccgttcttgttgtagatgccagcaggggagggtttgaa
gctggatttgagacgggaggacaaacacgagaacacggcctcttggttcggtctctcggg
gtcacacagcttgcagtggccgtcaacaagatggatcaggttaattggcaacaagaaaga
tttcaagagattactggcaaacttggccactttcttaagcaagcaggttttaaggaaagt
gatgtagcttttattcctacgagtggtctcagtggtgagaatctcatcacaagatctcaa
tcaagcgaactcacaaaatggtataaagggctctgtttattagaacaaattgattccttc
aagcctcctcagaggtctgttgacaagccttttaggttatgtgtgtctgacgttttcaaa
gatcaaggatctggattttgtgtaactggtaaaattgaagctggttacatccagactggg
gaccgactgctagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcac
gatgaacctgtcgactgggcggccgcgggcgatcatgtcagtcttacgttggttgggatg
gatatcatcaaaatcaatgtcggctgcatcttctgtggccccagggagcccattaaagcc
tgcactcgtttcagggcccgaatcctcatctttaatattgaaattcctgtcacaaaagga
tttcctgtgctgctccactaccagaccgtcagcgagcctgctgttattaagcgactgatt
agcatcttaaacaaaagcacgggcgaagtcacaaagaagaagcctaaattgttgactaaa
ggccagaacgcgctggtggagctgcagacacaaaggcccgtggctcttgagctctacaaa
gacttcaaggagctggggaggttcatgctgcgctacggcggcaccaccatcgctgccggc
gtggttaccgagataaaagaatga
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