Equus caballus (horse): 100073294
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Entry
100073294 CDS
T01058
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100073294 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100073294 (TNPO1)
03009 Ribosome biogenesis [BR:
ecb03009
]
100073294 (TNPO1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100073294 (TNPO1)
Ribosome biogenesis [BR:
ecb03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100073294 (TNPO1)
Pre-60S particles
100073294 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
IBN_N
Cnd1
HEAT_EF3_N
PDS5
Adaptin_N
CEP104-like_TOG
MMS19_C
HEAT_Maestro
INTS7_N
UNC45-central
TPR_TTI1_C
Dopey_N
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
100073294
NCBI-ProteinID:
XP_023473981
Ensembl:
ENSECAG00000024424
VGNC:
24394
UniProt:
A0A3Q2HEQ4
LinkDB
All DBs
Position
14:complement(91956402..92046977)
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AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRSVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
IKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtacgagtggaaacccgacgagcaggggctc
cagcagatcctgcagctgctcaaggagtcccagtccccggacaccaccatccagaggagc
gtacaacaaaaactggaacaactcaatcagtatccagattttaacaactacctgattttt
gttcttacaaaattaaaatctgaagatgaacccacaagatcactgagtggtctcatttta
aagaataatgtgaaggctcattttcagaacttcccgaatggcgtgacagactttattaag
agtgaatgtttaaacaatattggtgactcctctcctctgattagagccactgtaggtatt
ttgattacaaccatagcttccaagggagaactgcagaattggcctgacctcttaccgaag
ctctgcagcctcttggactctgaggactacaacacctgtgagggagcgtttggcgccctt
cagaagatatgtgaagattctgccgagattttagatagtgatgttttagatcgtcctctc
aacatcatgattcccaaatttttgcagttctttaagcacagtagtccgaaaataaggtct
catgctgtggcatgtgtcaatcagtttatcatcagtaggactcaagctctgatgttgcac
attgattcttttattgagaatctctttgcattggctggtgatgaagaaccagaggtacga
aaaaacgtgtgccgagcacttgtgatgttgcttgaagtgcgaatggaccgcctgcttcct
cacatgcataatatagtcgagtacatgctacagaggacccaagatcaagatgaaaatgtg
gctttggaagcctgtgaattttggctcactttggctgagcaaccaatatgcaaagatgta
ctcgtgaggcatcttcctaagttgattcctgtgttagtgaatggcatgaagtactcagat
atagatattattctgcttaagggtgatgttgaagaagatgaaacaattcctgatagtgaa
caggatataaggccacgttttcatcgatcaaggacagtggctcagcagcatgatgaagat
ggaattgaagaggaagatgatgatgacgatgaaattgatgatgacgatacaatttctgac
tggaatctaagaaaatgttctgctgctgccctagatgttcttgcaaatgtttatcgtgat
gagcttttgccacatattctgccccttttgaaagaattactttttcatcatgaatgggtt
attaaagaatctggcatcttggttttaggagcaattgctgaaggttgcatgcaaggcatg
attccatacctgcctgagctcattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacgtgctggactcttagccgctatgcacactgggtagtcagccaa
cccccagacacgtacctgaagccattaatgacagaattgctaaagcgtatcctggatagc
aacaagagagtgcaagaagctgcctgcagtgcctttgctaccctggaagaggaggcttgt
acagaacttgttccttacctggcttacatacttgatacgttggtctttgcgtttagtaaa
taccagcataagaacctgctcattctgtacgatgccataggaacgttagcagactcagta
ggacatcatttaaacaaaccagaatatattcagatgctaatgcctccgctgatccagaag
tggaacatgttaaaggacgaagataaagacctcttccctttgcttgagtgcctgtcttca
gttgccacagccctgcagtctggcttccttccgtactgtgaacctgtgtatcagcgttgt
gtaaatctggtacagaagacccttgcacaagccatgctgaacaatgctcaaccagatcag
tacgaggctccagataaagattttatgatagtggctctggatttactcagcggcctggcc
gaaggacttggcggcaacatcgaacagctggtagcccgaagtaacattctgacgctaatg
tatcagtgcatgcaggataaaatgccagaagttcgacagagttccttcgccctcttgggt
gacctgacaaaagcttgctttcagcatgttaagccttgtatagctgatttcatgccaata
ttgggaaccaacctaaacccagagttcatttcggtctgcaataatgccacatgggcaatt
ggagagatctccatccagatgggtatagagatgcagccttatatccctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaatacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgcacctctctgagaaacataagggacaatgaggagaaggactca
gcgttccgtgggatttgtaccatgatcagtgtgaatcccagcggcgtgatccaagatttt
atatttttttgtgatgctgttgcatcctggattaatccaaaggatgacctgagagacatg
ttctgtaagatccttcatggatttaaaaatcaagttggggatgaaaattggaggcgtttc
tctgaccagtttccgcttcccttaaaagagcgtcttgcagctttttacggtgtttaa
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