Equus caballus (horse): 100146281
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Entry
100146281 CDS
T01058
Symbol
SAMD1
Name
(RefSeq) LOW QUALITY PROTEIN: atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100146281 (SAMD1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
100146281 (SAMD1)
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_PNT
SAM_2
PTPRCAP
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
100146281
NCBI-ProteinID:
XP_023501001
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Position
7:46066045..46069287
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AA seq
541 aa
AA seq
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MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAAARPPRGPAA
AAAAAPPPTPXPPPPPAPVAAAAPARAPRAAAAAAATAPPSPGPAQPGPXAQRAAPLAAP
PPAPGAPPAVAXPGRPAPRPPPAVAAREPPLPPPPQPPAPPQQQQQPPPPPPQPQQPPEG
GAARAGGPARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRPERTRLGALAL
PRGDRPGRAPPAASARASRSKRGGEERVLEKEEEEDDDEDEDDEDDVSEGSEVPEGDRPA
GAQHHQLNGERGPQSAKERVKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGSA
SAATGPDSPSPVPLPPGKPALPGADGTPFGCPSGRKEKPADPVEWTVMDVVEYFTEAGFP
EQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGFL
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gctgcctcgtcgtccgctgcttccccccactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccgccgcgcgccccccgcggggccccgccgcc
gccgccgccgctgcgccgccgcccacgccgnccccgccgccaccgcccgcgcccgtcgcc
gccgccgccccggcccgggcgccccgcgcggctgccgctgccgccgccacagcgcccccc
tcgcccggccccgcgcagccgggccccngcgcgcagcgggccgcgcccctggccgcgccg
ccgcccgcgcccggcgctcctccggcggtggcgnnccccggccggcccgcgccgcgcccc
ccgcccgccgtcgccgcccgggagccgccgctgccgccgccgccacagccgccggcgccg
ccacagcagcagcagcagccgccgccgccgccgccgcagccacagcagccgccggagggg
ggcgcggcgcgggccggcggcccggcgcggcccgtgagcctgcgggaagtcgtgcgctac
ctcggaggcagcggcggcgccggcggccgcctgacccgcggccgcgtgcaggggctgctg
gaggaggaggcggcggcgcggggccgcccggagcgcactcggctcggagcgctcgcgctg
ccccgcggggacaggcccggacgggcgccgccggccgccagcgcccgcgcgtcgcggagc
aagagaggtggggaagagcgagtgcttgagaaggaagaggaggaagatgatgatgaagat
gaagatgatgaagacgatgtgtctgagggctctgaggtgcccgagggtgaccgtcccgca
ggtgcccagcaccaccagcttaatggcgagcggggccctcagagcgccaaggagagggtc
aaggagtggacaccctgcggaccccaccagggccaggatgaaggcagggggccggcacca
ggcagtggcacccgccaggtgttctccatggcagccatgaataaggaaggaggatcagcc
tctgctgccactgggccagactccccatctcctgtgcctttgcccccaggaaaaccagcc
ctacctggggccgatgggaccccctttggctgtccttctgggcgcaaggagaagccggct
gaccccgtggagtggacagtgatggacgtggtagagtacttcaccgaggccggcttccca
gagcaggcaacagccttccaagagcaggaaatcgatggcaagtccttgctgctcatgcag
cgcacagacgtgctgacgggcctgtctatccgcctcgggccggccctgaagatctacgag
caccacatcaaggtgctgcagcaaggccactttgaggatgacgaccccgatggctttcta
ggctga
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