Entry |
|
Symbol |
SAMD1
|
Name |
(RefSeq) LOW QUALITY PROTEIN: atherin
|
KO |
K26266 | sterile alpha motif domain-containing protein 1 |
|
Organism |
ecb Equus caballus (horse)
|
Brite |
KEGG Orthology (KO) [BR:ecb00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:ecb03036]
100146281 (SAMD1)
Chromosome and associated proteins [BR:ecb03036]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
100146281 (SAMD1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
7:46066045..46069287
|
AA seq |
541 aa
MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAAARPPRGPAA
AAAAAPPPTPXPPPPPAPVAAAAPARAPRAAAAAAATAPPSPGPAQPGPXAQRAAPLAAP
PPAPGAPPAVAXPGRPAPRPPPAVAAREPPLPPPPQPPAPPQQQQQPPPPPPQPQQPPEG
GAARAGGPARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRPERTRLGALAL
PRGDRPGRAPPAASARASRSKRGGEERVLEKEEEEDDDEDEDDEDDVSEGSEVPEGDRPA
GAQHHQLNGERGPQSAKERVKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGSA
SAATGPDSPSPVPLPPGKPALPGADGTPFGCPSGRKEKPADPVEWTVMDVVEYFTEAGFP
EQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGFL
G |
NT seq |
1626 nt +upstreamnt +downstreamnt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gctgcctcgtcgtccgctgcttccccccactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccgccgcgcgccccccgcggggccccgccgcc
gccgccgccgctgcgccgccgcccacgccgnccccgccgccaccgcccgcgcccgtcgcc
gccgccgccccggcccgggcgccccgcgcggctgccgctgccgccgccacagcgcccccc
tcgcccggccccgcgcagccgggccccngcgcgcagcgggccgcgcccctggccgcgccg
ccgcccgcgcccggcgctcctccggcggtggcgnnccccggccggcccgcgccgcgcccc
ccgcccgccgtcgccgcccgggagccgccgctgccgccgccgccacagccgccggcgccg
ccacagcagcagcagcagccgccgccgccgccgccgcagccacagcagccgccggagggg
ggcgcggcgcgggccggcggcccggcgcggcccgtgagcctgcgggaagtcgtgcgctac
ctcggaggcagcggcggcgccggcggccgcctgacccgcggccgcgtgcaggggctgctg
gaggaggaggcggcggcgcggggccgcccggagcgcactcggctcggagcgctcgcgctg
ccccgcggggacaggcccggacgggcgccgccggccgccagcgcccgcgcgtcgcggagc
aagagaggtggggaagagcgagtgcttgagaaggaagaggaggaagatgatgatgaagat
gaagatgatgaagacgatgtgtctgagggctctgaggtgcccgagggtgaccgtcccgca
ggtgcccagcaccaccagcttaatggcgagcggggccctcagagcgccaaggagagggtc
aaggagtggacaccctgcggaccccaccagggccaggatgaaggcagggggccggcacca
ggcagtggcacccgccaggtgttctccatggcagccatgaataaggaaggaggatcagcc
tctgctgccactgggccagactccccatctcctgtgcctttgcccccaggaaaaccagcc
ctacctggggccgatgggaccccctttggctgtccttctgggcgcaaggagaagccggct
gaccccgtggagtggacagtgatggacgtggtagagtacttcaccgaggccggcttccca
gagcaggcaacagccttccaagagcaggaaatcgatggcaagtccttgctgctcatgcag
cgcacagacgtgctgacgggcctgtctatccgcctcgggccggccctgaagatctacgag
caccacatcaaggtgctgcagcaaggccactttgaggatgacgaccccgatggctttcta
ggctga |