Equus caballus (horse): 100146534
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Entry
100146534 CDS
T01058
Symbol
CDH23
Name
(RefSeq) cadherin-23 isoform X1
KO
K06813
cadherin 23
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecb03037
]
100146534 (CDH23)
04515 Cell adhesion molecules [BR:
ecb04515
]
100146534 (CDH23)
Cilium and associated proteins [BR:
ecb03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100146534 (CDH23)
Cell adhesion molecules [BR:
ecb04515
]
Cadherins
Major cadherins
100146534 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
100146534
NCBI-ProteinID:
XP_023500302
LinkDB
All DBs
Position
1:59840559..60236513
Genome browser
AA seq
2160 aa
AA seq
DB search
MRGPRSLDRERNSSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLR
ETAGIGTSVIVVRATDRDTGDGGLVNYRILSGAEGKFEVDESTGLIITVEYLDYETKTSY
LMNVSATDQAPPFNQGFCSVYVTLLNELDEAVQFSNASYEAAILENLALGTEIVRVQAYS
IDNLNQITYRFDAYTSAQAKALFKIDAITGVITVKGLVDREKGDFYTLTVVADDGGPKVD
STVKVYITVLDENDNSPRFDFTSDSAVSVPEDCPVGQRMATVKARDPDAGSNGQVVFSLA
SGNIAGAFEIITTNDSTGEVFVARPLDREELDHYILKVVASDRGTPPRKKDHILQVTILD
VNDNPPVIESPFGYNVSVNENVGGGTAVVQVRASDRDIGINSILSYYITKGNEDMTFRMD
RISGEIATRPAPPDRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNTPVFQQPHY
EILLDEGPDTINTSLITIQALDLDEGPNGTVAYAIVTGNIINTFRINSHSGVISAAKELD
YEISQGRYTLIVTATDQCPILSRRLTSTATVLVNVNDINDNVPTFPRDYEGPFDVTEGQP
GPRVWTFLAHDRDSGPNGQVEYGILDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNL
TICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPISSFVAHVLASDAD
SGCNALLTFNITAGNRERAFSINATTGIVTVNRPLDRERIPDYKLTISVKDNPDNPRIAR
RDFDLLLIFLVDENDNQPLFTESTYQAEVMENSPAGTPLTVLNGPILALDADLDVYAVVT
YQLLGSQSGLFDINNSTGMVTVRSGVIIDREAFSPPVLELLLLAEDIGLLNSTADLLVTI
LDDNDNFPTFSPATLTVHLLENCPPGFSVLQVTATDEDSGLNGELIYRIEAGAQDRFLIH
PVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIITILIDDINDSRPEFLNPIQ
TVSVLESVEPGTVIANVTAIDRDLDPKLEYRIIGIVAKDDTDRLVPDQEDAFAVNINTGS
VMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTPQFKPFGIT
YYTERILEGATLGTTLIAVAAVDPDKGLNGLITYTLLDLMPPGYVQLEDSSAGKVIANRT
VDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDVPVGT
VILTVTATDADSGNFALVEYSLGDGEGKFAINPVTGDIYVLSSLDREKKDHYILTALAKD
NPGDAASNRRENSVQVVIQVLDINDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEG
SNGELAYSLEGPGVEAFYVDIDSGLVTTKRPLQSYERFNLTVVATDGGQPPLWGTTMLLV
EVIDVNDNRPIFVRPPNGTILHIREETPLRSNVYEVYATDKDEGLNGAVRYSFLKTAGNR
DWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNE
PLFVRPPKGSPQYQLLTVPEHSPHGTLVGNVTGAVDADEGPNAIVYYFIAAGNEEKNFHL
HPDGRLLVLRDLDREREAVFSFIVKASSNSSWTPPRGPSPALDLVTDLTLQEVRVVLEDI
NDQPPRFTKAEYTAGVATDAKVGSELIQVLALDADIGNNSLVFYSILAIHYFRALANDSE
DMGQVFTMGSMDGILRTFDLFMAYSPGYFVVDIVARDLAGHNDTAVIGIYILRDDQRVKI
VINEIPDRVRDFEEEFIRLLSNITGAIVNTDDVQFHVDKKGRVNFAQTELLIHVVNRETN
RILDVDRVIQMIDENKEQLRNLFRNYNVLDVQPAISVRLPDDMSALQMAIIVLAILLFLA
AMLFILMNWYYRTIHKRKLKAIVAGSAGNRGFIDIMDMPNTNKYSFDGANPVWLDPFCRN
LELAAQAEHEDDLPENLSEIADLWNSPTRTHGTFGREPAAVKPDDDRYLRAAIQEYDNIA
KLGQIIREGPIKLIPTELEEEPGECSPGQGSLRFCHKPPTELKGPDGIHMVHGSTGTLLA
TDLNSLPEDDQKGLGRSLETLTAAEASAFERNARTESAKSTPLHKLRDVIMESPLEITEL
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggccccggtccctggaccgggagcgaaactcatcccacgtgctgatagtagag
gcctacaaccacgacctgggccccatgcggagctccgtcagggtgatagtgtatgtggag
gacgtcaacgacgaggcccctgtgttcacacagcagcagtacagccgcctggggcttcgc
gagaccgcaggcatcggcacgtccgtcatcgtcgtccgagccaccgaccgagatactggg
gacggcggcctggtgaactaccgcatcctgtcgggcgcggaggggaagttcgaggttgac
gagagcacggggctcatcatcaccgtggagtacctggactacgagaccaagaccagctac
ctgatgaacgtgtcagccaccgaccaggcaccacccttcaaccagggcttctgtagcgtc
tatgtcactctgctcaatgagctggacgaggctgtgcagttctccaatgcctcctacgag
gctgccatcctggagaacctggccctgggcactgagatcgtgcgggtccaggcctactcc
attgacaacctcaaccagatcacctaccgcttcgacgcctacaccagtgcccaggccaaa
gccctcttcaagatagatgccatcacgggtgtgatcacagtcaagggcctggtggaccgg
gagaaaggtgacttctatacattgacagtggtggcggacgacggtggccccaaagtggac
tccaccgtgaaggtctacatcactgtgctggacgagaatgacaacagcccccggtttgac
ttcacctctgactcagcagtcagcgtgcccgaggactgccccgtgggccagcgcatggcc
accgtcaaggcccgggaccccgacgccggcagcaacgggcaggtggtcttctccctagcc
tctggcaacatcgccggggcctttgagatcatcaccaccaacgactccactggtgaagtg
ttcgtggccaggcccctggacagagaagagctggaccactacatcctcaaggttgtggca
tccgaccgtggcacccctccacggaagaaggaccacatcctgcaggtgaccatcctggac
gtcaatgacaacccgccagtgattgagagcccctttggctacaatgtcagcgtgaatgag
aacgtgggcgggggtaccgctgtggttcaggtgagagcctctgaccgtgacatcgggatc
aacagcatcctgtcctactacatcaccaagggcaatgaggacatgaccttccgcatggac
cgcatcagtggcgagatcgccacgcggcctgccccaccagatcgagagcgccagagcttc
taccacctggtggtcaccgtggaggacgagggcacccccaccctgtcggccaccactcac
gtgtatgtgaccatcgtggatgagaatgataacacacccgtgttccagcagccccactat
gagattttactggatgagggcccggacaccatcaacactagcctcatcaccatccaggca
ctagacttggacgaagggcccaatggcacagttgcctatgccattgtcacaggcaacatc
ataaacaccttccgtatcaacagtcactcgggcgtcatcagtgccgccaaggagctggac
tacgagatcagccagggccgctacaccctgatcgtcactgccacggaccagtgccccatc
ttgtcccgccgcctcacttccaccgccacggtgctcgtgaacgtgaatgacatcaatgac
aacgtgcccaccttcccccgagactatgaggggccatttgatgtcaccgagggccagcca
gggcccagagtgtggaccttcctggcccacgaccgggactcaggccccaatgggcaggtg
gagtacggcatcttggatggagaccctctgggggagtttgtgatctctcccgtggagggg
gtgctgcgggtccggaaggatgtggagctggaccgggagaccattgccttctacaacctg
accatctgtgcccgcgacaggggaatgcccccactcagctccacgatgctggtggggatt
cgggtactggacatcaatgacaatgaccccgtgctgctgaacctacccatgaacatcacc
atcagtgagaatagccccatctccagcttcgtcgcccacgtcctggccagtgacgctgac
agcgggtgcaatgcactcctcaccttcaacatcactgccggcaaccgagagcgggccttc
tccatcaatgccacgacagggatcgtcactgtgaaccggcccctggaccgtgaacggatc
ccggattacaagctgaccatctccgtgaaggacaacccggacaacccacgcatagccagg
agggattttgacttgctgctgatctttcttgtggatgagaatgacaatcagcccctcttt
actgagagcacctaccaggcagaggtgatggagaactctcccgctgggacgcctctcaca
gtgctcaatgggcctatcctggcactggatgcagacctggacgtctatgctgtggtgacc
taccagctgctgggttcccagagcggcctctttgacattaacaacagcaccggcatggtg
acagtgaggtcaggtgtcatcattgaccgggaggccttctcaccccctgtcctggagctg
ctactattggctgaggacatcggactgctcaacagcacagccgacctacttgtcaccatc
ctggacgacaatgacaactttcccacctttagccctgccaccctcacggtccacctgctg
gagaactgcccacctggattctcagtccttcaggtcacagccacggacgaggacagtggt
ctcaatggggagctgatctaccgaatagaagctggggctcaggaccgcttcctcatccac
ccagtcactggggtcatccgcgtcggcaatgccaccattgacagggaggagcaggaatcc
tacaggctgacagtggtggccaccgaccggggcaccgtccctctctcgggcacagccatc
atcactatccttattgatgacatcaatgactcccgccccgagttcctcaatcccatccag
acagtgagtgtgctggagtcagttgagcctggcactgtcattgccaacgtcactgccatc
gaccgcgacctcgacccaaagctggagtaccgcatcattggcattgtggccaaagatgac
actgaccgcctggtgcctgaccaggaggatgcctttgccgtgaatatcaacacagggtct
gtaatggtgaagtcccccctgaaccgggaactggttgccacctatgaggtcactctctcg
gtgattgacaatgcaagtgacctaccagagcgctctgtcagtgtgccaaatgccaagctg
acagtcaacatcctggacgtcaatgacaatacaccccagttcaagcccttcgggatcacc
tactacacagagcggatcctggagggggccaccctgggcaccacactcatcgctgtggca
gctgtggaccctgacaagggcctcaatgggctgatcacctacacgctgctggacctgatg
cccccaggctacgtccagctggaagactcctcagcagggaaggtcattgccaaccggacg
gtggactatgaggaagtgcactggctcaactttacagtgagggcctcagacaatgggtcc
ccaccccgggcagctgagatccctgtctacctggagattgtggacatcaatgacaacaac
cccatttttgatcagccctcctaccaggaggccgtctttgaggacgtgcctgtgggcaca
gtcatcctgacagtcactgctactgatgccgactcaggcaactttgccctcgttgagtac
agccttggggatggagagggcaagtttgccatcaaccccgttacgggtgacatctatgtg
ctgtcctctctggaccgggagaagaaggaccactatatcctgactgccttggccaaagac
aaccctggggatgcagccagcaaccgacgagaaaattcggtgcaggtggtgatccaggta
ctggacatcaatgactgccggccacagttctccaaaccccagttcagcactagcgtgtat
gagaatgagccagcaggtacctcagtcatcaccatgatggccacagaccaggatgagggc
tccaatggggagttggcctactcactggagggccctggagtggaggccttctacgtggac
atagactcaggcctggtgaccacaaagcggccactgcagtcctacgaaaggttcaacctg
accgtggtggccacggatggtgggcagcccccactctggggcaccactatgctcctggtg
gaggtcatcgacgtcaatgacaaccgccccatcttcgtgcgcccacccaacggcaccatc
ctccacatcagagaggagaccccgctgcgctccaatgtgtacgaagtctacgccacagac
aaggacgagggcctcaacggggccgtgcgctacagctttctgaagacggcgggcaaccgg
gactgggagtacttcaccatcgacccaattagcggcctcatccagaccgcgcagcgcctg
gaccgcgagaagcaggcggtgtacagccttatcctggtggccagtgacctgggccagccg
gtgccatacgagacgatgcagccactgcaggtggccctggaggacatcgacgacaatgaa
cccctcttcgtgaggcctccgaaaggcagcccccagtaccagctgttgacagtgcctgag
cactccccacatggcaccctcgtgggcaacgtgacaggcgccgtggacgcagatgaaggc
cccaatgccatcgtgtactacttcatcgcagccggcaacgaagagaagaacttccatctg
catcccgatgggcgtctgcttgtgctgcgggacctggacagggagcgtgaagccgtcttc
tccttcatcgtcaaggcttcaagcaatagcagctggacacctccccgtgggccctctcca
gccctcgacctggtcactgacctcaccctgcaggaggtgcgcgttgtactagaggacatc
aatgaccagccgccacgcttcaccaaggctgagtacactgcaggagtggccactgatgca
aaggtgggctcggagttgatccaggtcctggccctggatgcagacattggcaacaacagc
ctggtcttctacagcatcctggccatccactacttccgggcccttgccaacgactctgag
gacatgggccaggttttcaccatggggagcatggatggcatcctgcgcaccttcgacctc
ttcatggcctacagccctggctactttgtggtggacattgtggcccgggacctggcaggc
cataatgacacggctgtcatcggcatctacatcctgagggatgaccagcgtgtcaagatc
gtcattaatgagatccccgaccgtgtgcgtgactttgaggaggaatttatccgcctgctc
tccaacatcactggtgccattgtcaacacagatgacgtgcagttccacgtggacaagaag
ggtcgagtgaacttcgcacagacagagctgctcatccacgtggtgaaccgtgagaccaac
cgcatcctggatgtggaccgggtgatccagatgattgacgagaacaaggaacagctgcgg
aatctgttccggaactacaacgtcctggatgtgcagcctgccatctctgtccggctgccc
gacgacatgtctgccctgcagatggcgatcattgtcctggccattctcctgttcctggct
gccatgctcttcatcctcatgaactggtactacaggaccatacacaagaggaagctcaaa
gccattgtggctggctcggcggggaatcgtggcttcattgacatcatggacatgcccaac
accaacaagtattcttttgacggggccaatcccgtgtggctggatcctttctgccgaaac
ctggagctggccgcccaggccgagcacgaggacgacctgccggagaacctgagtgagatc
gccgacctgtggaacagccccacccgcacccacggaacttttgggcgtgaaccagcagca
gtcaagcctgacgacgaccggtacctgcgggcagccatccaggagtatgacaacattgcc
aagctgggccagatcattcgagaggggcccatcaagctgatcccgactgagctggaggag
gagccaggagagtgcagccctggccagggcagcctgcgcttctgccacaagccaccgaca
gagctcaaggggccggatgggatccacatggtgcatggcagcacgggcacgctgctggcc
actgacctcaacagcctgcccgaggatgaccagaagggcctgggtcgctcgctggagacc
ctgacggccgctgaggccagcgccttcgagcgcaacgcccgcacagagtccgccaaatcc
acacccctgcacaagcttcgcgatgtcatcatggagagtcccctggagatcactgagtta
tga
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