KEGG   Equus caballus (horse): 100146775
Entry
100146775         CDS       T01058                                 
Symbol
PABPC1L2A
Name
(RefSeq) polyadenylate-binding protein 1-like 2
  KO
K13126  polyadenylate-binding protein
Organism
ecb  Equus caballus (horse)
Pathway
ecb03015  mRNA surveillance pathway
ecb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100146775 (PABPC1L2A)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100146775 (PABPC1L2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecb03019]
    100146775 (PABPC1L2A)
   03041 Spliceosome [BR:ecb03041]
    100146775 (PABPC1L2A)
Messenger RNA biogenesis [BR:ecb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100146775 (PABPC1L2A)
   mRNA cycle factors
    Stress granule specific factors
     100146775 (PABPC1L2A)
Spliceosome [BR:ecb03041]
 Complex C
  Other components
   Complex C specific factors
    100146775 (PABPC1L2A)
SSDB
Motif
Pfam: RRM_1 RRM_5 Nup35_RRM RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 100146775
NCBI-ProteinID: XP_023489304
Ensembl: ENSECAG00000002620
LinkDB
Position
X:57620553..57623320
AA seq 200 aa
MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL
ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCK
VACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQ
STSADVKDFEEDTDEEATFR
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcctcgctgtacgtgggcgacctgcaccctgaggtgacagaggcaatgctgtacgag
aagttcagcccggccgggcccatcctctccattcgcatttgcagggacaagatcacccgc
cgttccttgggctacgcgtatgtcaactaccagcaaccggtggacgccaagcgggccctg
gagaccctgaactttgatgtcatcaagggcaggccggtgcgcatcatgtggtcccagcgg
gacccctcgctccgcaagagcggggtgggcaacgtcttcatcaagaatctgggcaagacc
atcgacaacaaggcgctgtacaacatcttctcggcgttcggcaacatcctctcctgcaaa
gtggcctgcgacgaaaaggggcccaagggctacgggttcgtgcacttccagaagcaggag
tctgcggagcgggccatcgatgcgatgaatggcatgttcctgaactaccgcaaaattttc
gtgggaagattcaagtcgcataaagaacgagaggccgaaaggggagcctgggccaggcag
tccactagtgctgacgtcaaggatttcgaggaagacaccgatgaggaggctacctttcga
tga

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