Equus caballus (horse): 100146775
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Entry
100146775 CDS
T01058
Symbol
PABPC1L2A
Name
(RefSeq) polyadenylate-binding protein 1-like 2
KO
K13126
polyadenylate-binding protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100146775 (PABPC1L2A)
09123 Folding, sorting and degradation
03018 RNA degradation
100146775 (PABPC1L2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100146775 (PABPC1L2A)
03041 Spliceosome [BR:
ecb03041
]
100146775 (PABPC1L2A)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100146775 (PABPC1L2A)
mRNA cycle factors
Stress granule specific factors
100146775 (PABPC1L2A)
Spliceosome [BR:
ecb03041
]
Complex C
Other components
Complex C specific factors
100146775 (PABPC1L2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
100146775
NCBI-ProteinID:
XP_023489304
Ensembl:
ENSECAG00000002620
LinkDB
All DBs
Position
X:57620553..57623320
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AA seq
200 aa
AA seq
DB search
MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL
ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCK
VACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQ
STSADVKDFEEDTDEEATFR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctgtacgtgggcgacctgcaccctgaggtgacagaggcaatgctgtacgag
aagttcagcccggccgggcccatcctctccattcgcatttgcagggacaagatcacccgc
cgttccttgggctacgcgtatgtcaactaccagcaaccggtggacgccaagcgggccctg
gagaccctgaactttgatgtcatcaagggcaggccggtgcgcatcatgtggtcccagcgg
gacccctcgctccgcaagagcggggtgggcaacgtcttcatcaagaatctgggcaagacc
atcgacaacaaggcgctgtacaacatcttctcggcgttcggcaacatcctctcctgcaaa
gtggcctgcgacgaaaaggggcccaagggctacgggttcgtgcacttccagaagcaggag
tctgcggagcgggccatcgatgcgatgaatggcatgttcctgaactaccgcaaaattttc
gtgggaagattcaagtcgcataaagaacgagaggccgaaaggggagcctgggccaggcag
tccactagtgctgacgtcaaggatttcgaggaagacaccgatgaggaggctacctttcga
tga
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integrated database retrieval system