Equus caballus (horse): 100146838
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Entry
100146838 CDS
T01058
Symbol
SYN1
Name
(RefSeq) synapsin-1 isoform X1
KO
K19941
synapsin
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100146838 (SYN1)
Membrane trafficking [BR:
ecb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100146838 (SYN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
Dala_Dala_lig_C
Motif
Other DBs
NCBI-GeneID:
100146838
NCBI-ProteinID:
XP_023489927
Ensembl:
ENSECAG00000001372
VGNC:
23796
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All DBs
Position
X:complement(40022423..40066820)
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AA seq
706 aa
AA seq
DB search
MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPAAPSPGAAPGPATATAERASAAAPV
ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAAARVLLVID
EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVMRSLKP
DFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLG
TEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKT
YATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTC
SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPR
QRQRDASPGRGSHSQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPP
LQQRPAPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPATQAPPLSQGQGRQSRPVAGGP
GAPPAARPPASPSPQRQAGPPQATRQTSVSGQAPPKASGAPPGGQQRQGPPQKPPGPAGP
TRQASQAGPMPRTGPPTTQQPRPSGPGPAGRPTKPQLAQKPSQDVPPPATAAAGGPPHPQ
LNKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaactacctgcggcgccgcctgtcggacagcaacttcatggccaatctgccaaatggg
tacatgacagacctgcagcgcccgcagccacccccgccgccgcctgctgcccccagcccc
ggagccgcgcccggtcccgcgaccgccactgccgagagggcctccgcggccgcccccgtg
gcctctccggccgcccctagccccgggtcttcggggggaggtggcttcttctcgtcgctg
tccaacgctgtcaagcagaccacggcggccgcggccgccaccttcagcgagcaggtgggc
ggcggatctgggggcgcaggccgtgggggcgccgccgccagggtgctgctggtcatcgac
gagccccacactgactgggcgaaatacttcaaagggaaaaagatccatggagaaattgac
attaaagtagaacaggctgaattctctgatctcaacctcgtggcccatgccaatggggga
ttctctgtggacatggaagttcttcggaatggggtgaaggtcatgcggtctctgaagccg
gactttgtgctgatccgccagcatgccttcagcatggcacggaatggagactaccgcagt
ttggtcatcgggctgcagtatgccggaatccccagcgttaactctttgcattctgtctac
aacttttgtgacaagccctgggtgtttgcccagatggttcgactgcacaagaaactggga
acagaggaattccctctgatcgatcagaccttctaccccaatcacaaagagatgctcagc
agcacgacgtaccctgtggttgtgaagatgggacatgcacactctgggatgggcaaggtc
aaggtggacaaccagcatgacttccaggacattgcaagtgtcgtagcactgaccaagaca
tatgccactgccgagcccttcattgatgccaaatatgacgtgcgtgtccagaagattggg
cagaactacaaggcctacatgcggacgtcagtgtcaggaaactggaagaccaacactggc
tctgcaatgcttgagcagattgccatgtctgacaggtacaagctgtgggtggacacatgc
tcagagatttttgggggactggacatctgcgccgtggaagcgctgcatggcaaggatgga
agggatcacatcatcgaggtggtgggctcctccatgccactcattggcgaccaccaggat
gaagacaagcagctcatcgtagagctcgtggtcaacaagatggcccaggccctgccccgg
cagcggcagcgggacgcctccccgggcaggggctcccacagccagactccatccccaggg
gccctgcccttgggccgccagacctcccagcagcccgcagggccaccggctcagcaacgc
cccccaccacagggtggccctccacagccgggcccaggcccccaacgccagggacccccg
ttgcagcagcgcccagccccgcagggacagcagcacctttcgggccttggacccccagct
ggcagccccctgccccagcgcctaccaagtcccacatcagcgccccagcagcctgcaacc
caggccccgccgctgagccagggtcaaggccgccaatcccggccagtggcgggaggaccc
ggggcaccgcctgcagcccgcccacctgcctccccttctccccagcgccaggcaggcccc
ccacaggctacccgtcagacctccgtctctggtcaggctccgccaaaggcctcaggggct
ccacccggtggtcagcagcgccagggcccaccccagaaacccccaggccctgccggcccc
acacgccaggccagccaggcgggtcccatgccccgcactgggccacccaccacgcagcag
ccgcggcccagcggcccaggccccgctggacgtcccaccaagccacagctggcccagaaa
cccagccaggatgtgccaccacccgccaccgctgctgccgggggacccccgcacccccag
ctcaacaaatcccagtctctgaccaatgccttcaaccttccagagccagccccgcccagg
cccagccttagccaggacgaggtgaaagctgagaccatccgcagcctgaggaagtctttc
gccagcctcttctccgactga
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