Equus caballus (horse): 100146911
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Entry
100146911 CDS
T01058
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100146911 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
100146911
NCBI-ProteinID:
XP_023506019
LinkDB
All DBs
Position
10:complement(20409949..20453868)
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AA seq
2162 aa
AA seq
DB search
MMTHSPASSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGAPGSLASVRGFQG
RSMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGL
FQPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTG
LKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAH
IDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCEL
LLYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNK
ETCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAAR
RRGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSAGAPGPTSGPQGQSQPSAPTT
KLSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSAGGPG
GSLGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKG
RIGWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDTPSDYIIKEKTVLLQ
KKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNG
QNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPPTISLRSK
SMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESP
GPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRP
YLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPGSG
GPLPASSPASFDGPTPPDTRLGGREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAH
PPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGGGGAGGGPSQT
PALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGAGLPPAPSPTSPASPQ
PPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPSQPEPAGGSSSAPSPA
PAMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFLSTD
AGDEEGGEGALGAGAPPGPRLRHSKSIDEGMFSAEPYLRLEAASAGGGGGYGAYGAGGRA
YGASGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGPPQPPPR
PPSPRYEAPPPTPHHHSPHAHHEPVLRLWGAPPPDPARRELGYRAGLGSQEKSLPASPPA
ARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKAWRAGAPEEPERLPLHVRFLENCQ
PRASGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSPRGSEENGLPLLVLPPPAPSVDVEDG
EFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLPPVPPPAVAAAPPTLDS
TASSLTSYDSEVATLTQGAPAAAGDPPPPGPPAPAAPAPPAPQPGPDPPPGTDSGIEEVD
SRSSSDHPLETISSASTLSSLSAEGGGPAGAGGAGGGAGVASGTELLDTYVAYLDGQAFG
GSGTPGPPYPPQLMTPSKLRGRALGASGGLRPSPSGGLRDAVTPTSPTVSVTGAGTDGLL
ALSGCPGPSSVGVAGGPVAVEPEGPSVPLPSASSLPRKLLPWEEGPGPPPPPLPGPLAQP
QASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYIPERTSS
LQRQRLSEDSQSSLLSKPVSSLFQNWPKPPLPPLPAGSGVSPSAAAAPGATSPSASSSTS
SRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSP
TGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWT
KFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFL
ER
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgt
cccgagggcggctcagagtccgacagctccccagacgggcccgggagaggcccccggggg
acccggggccggggcagcggggcacctggtagcctggcctcggttcgaggcttccagggc
cgctccatgtctgtcccggacgacgcccacttcagcatgatggtcttccggattggcatc
ccggacttgcaccagacaaaatgcctccgcttcaacccggatgccaccatctggacggcc
aagcagcaggtgctctgcgccctgagcgagagcctgcaggacgtgctcaactatgggctg
ttccagcccgccacctcgggtcgcgacgccaacttcctggaggaggagcggctgctgagg
gagtacccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccga
gtttacaaacagaccaacctggatgagaagcagctggccaagttgcacacgaagacgggg
ttgaagaagtttctggaatacgtgcagctcgggacgtccgacaaggtggcacggctgctg
gacaaggggctggaccccaattatcacgactcggattcaggagagacccccctgacgctg
gctgcccagacggaaggctccgtggaggtgattcgaaccctgtgcctgggcggggcccac
atcgacttccgggcccgggatggcatgacggcgctgcacaaggctgcctgcgcccgtcac
tgcctggctctcacggcactcctcgaccttgggggctcccccaactacaaggatcgccgg
ggcctgacccctctgttccatacggctatggtggggggcgacccccgctgctgtgagctg
ctcctgtacaacagggcccagctgggcatagccgatgagaacggctggcaggaaatccac
caggcctgccagcgaggtcactctcaacacctggaacacctgctcttctacggggctgag
cccggagcccagaacgcctcagggaacacggccttgcacatctgcgccctctacaataag
gagacctgcgccaggatcctcctctatcgaggggccaacaaggatgtgaagaataacaac
ggacagacgcccttccaggtggcggtgatcgctgggaattttgaactgggggagctgatc
cgaaaccatcgagaacaggatgtggtgcccttccaggagtcccctaagtacgcagcccgg
cgacggggacccccaggcgcagggctgacggtgccccccgcgctgctgcgggccaacagt
gacaccagcatggccctgcccgactggatggtgttcgccgccccggggacctcgtccgcc
ggggcccccggccctacctcagggccccagggccagtcgcagccctcggcccccaccacc
aagctcagcagtgggaccctccgaagtgccagcagcccccggggtgcccgggcccgctcc
ccatcccgcgggaggcaccccgaggaggccaagaggcagccccgtggacggcccagctcc
agcgggacaccccgagaagggccggctgggggcaccgggggctcggcggggggccctggg
ggctccctgggcagccgagggaggcgccgcaagctgtactcggcggtaccgggacgctcc
ttcatggccgtgaagtcataccaggcccaagccgagggggaaatctctctgagcaaggga
gaaaagatcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggt
cgcatcggctggttcccctctgactgcctggaagaggtggcaaaccgctcccaggaagca
aagcaagaaagccgaagtgacaaggcaaagagactcttccggcattataccgtgggctcc
tacgacagctttgataccccaagcgattacatcattaaggagaagacagtcctgctgcag
aagaaagacagcgaggggtttgggttcgtgctccggggggccaaggcgcagacccccatc
gaggagttcacccccaccccggccttcccggcactgcagtatctggagtcggtggacgag
ggtggcgtggcatggcgagccggactgcgcatgggcgacttcctcatcgaggtgaacggg
cagaacgtggtgaaggtcggccaccggcaggtggtgaacatgatccgccaggggggcaac
acgctgatggtcaaggtggtgatggtgaccaggcacccagacatggatgaggctgtccat
aagaaagcaccccagcaagctaagcggctcccacccccaaccatctccctgcgttccaag
tctatgacctcagagctggaggagatggtctccccctggaagaagaagagtgagtacgag
cagcagccggcgccggtgcccagcatggagaaaaagcggaccgtgtatcagatggctctc
aacaaactggatgaaattttggcggcagctcagcagaccatcagtgcaagcgagagtcct
gggcctggtggcctcgcgtccctgggcaaacaccggcccaaaggcttctttgccactgag
tcgagcttcgatccccaccaccgctcccagccaagttacgaacgtccttcttacctgcct
ccaggacctggccttatgctccggcaaaaatctatcggggctgcagaagatgatagaccc
tacctagcgcccccagccatgaagttcagccgcagcctctctgtgcctggttcggaggac
atccccccgccgcccaccacgtccccaccggagcccccctacagcacacctccggccccc
tcctcctccggccgcctcaccccctccccccggggagggcccttcaaccccggctcggga
ggtcccctgcccgcctcttcccctgcatcctttgatgggcccacccctcctgacacccgc
ctagggggccgagagaagagcctgtaccacagcgggcccctgccccctgcccaccaccac
ccgccccaccatcaccaccaccacgctccgcctccgcagcctcaccaccaccacgcccac
ccccctcaccccccggagatggagacgggtggctcccccgacgaccccccgccgcgattg
gcgctggggccccagcccagcctgcggggctggcggggcggcgggcccagcccgaccccg
ggggccccgtcgccgtcccaccacggcggcgggggcgcgggcggcggcccctcccagacg
ccggccctgcgctacttccagctgcctccccgggcggccagcgcggccatgtacgtgccc
gcgcgctcgggccgcgggcgcaaaggcccgctggtcaagcagaccaaagtcgagggcgaa
ccccaaaagggcgccggcctcccgcccgccccgtcgcccacctccccggcgtccccgcag
ccgccaccgccggccgcggccgccccgtcggagaagaactccatccccatccccaccatc
atcatcaaggctccgtccaccagtagcagcggccgcagcagccagggcagcagcaccgag
gcggagccccccagccagccggagcccgccggcggctcctcctccgcgcccagccccgcc
ccggccatgtcccccgtgccgccgtccccctcgcccgtgcccacgcccgcgtcgcccagc
ggcccggccaccctcgacttcaccagccagttcggggcggccctggtgggggcggcccgg
agagaggggggctggcagaacgaagcccgccggcgctccacgctcttcctctccaccgac
gcgggggacgaggagggcggcgagggcgcgctgggcgcaggggcgcccccgggtccccgg
ctgcggcactccaagtccatcgacgagggcatgttttccgccgagccctacctccggctg
gaggctgcgagcgccggcggcggcgggggctacggggcctacggagccggcggccgcgcc
tacggggcgagcggcggcagcagcgccttcaccagcttcctgccgccccggcccctggtc
cacccgctgaccggcaaggccctggacccagcctccccgctcgggctggccctggctgcc
cgagagcgggcgctgaaggagtcctcggagggcggggggcccccccagccccctcccagg
cccccgtcgccccgctacgaggccccgccgcccactcctcaccatcactcgccccacgcc
caccatgagccggtgctgcgtctctggggggctcccccgccggaccccgcccgccgggag
ctggggtaccgggcggggctgggcagccaggagaagtccctgccggccagcccaccggcc
gcgcggcgctccttgctgcaccgcctgccccccacggctcctggggtcgggcccctcctg
ctgcagctggggccggagccccccgccccgcaccccggggtgagcaaggcctggagggcc
ggagcccccgaggagcccgagcggctgcccctccacgtgcggttcctcgagaactgccag
ccccgggccagtggggcgggtggaaggggacccccctcggaggacgggccgggggtcccg
ccgcccagcccgcgccggtccgtgcccccctcgccgacctccccgcggggcagcgaagaa
aacgggcttcccctgctcgtcctgccgccccccgcgccctcggtggatgtggaagatggc
gaattcctcttcgtggaaccgctgcccccgcccctcgagttctccaacagcttcgagaag
cccgagtcgcccctcacgcctgggcctccccacccgctgccggacccacccaccccgacc
accccgctgccccctgtgccgccccctgcggtcgccgccgcccctcccaccctggactcc
accgcatccagcctgacttcctacgacagtgaggtggccacactaacccagggggccccc
gctgctgccggggacccccctccgccaggcccaccagccccagccgcaccggctcccccc
gccccccagcctggcccggaccccccgcctggcacagactctggtatcgaggaggtggac
agtcggagcagtagcgaccaccctctggagaccatcagcagtgcgtccacgctgagcagc
ctgtcggccgaaggcggtggccccgcaggggcgggtggcgctgggggtggggccggggtg
gccagtgggacggagcttctggacacgtatgtggcctacctggacggccaggccttcgga
gggagcggaactccgggcccaccgtaccccccgcagctcatgactccctccaagctccgg
ggacgggcgctgggggctagtggaggcctgcggcccagccccagtgggggactccgagac
gcggtcactcccaccagccccacggtctcggtgacgggggctggaaccgatgggctgctg
gccctgagtggttgcccgggaccctcgtcggtgggcgtggccgggggtccggtggctgtg
gagccagaaggcccatcagtgcccttgccgtcggcctcctctctgccccggaagctgctg
ccctgggaggagggcccgggccccccgccaccacccctgcccgggcccctggcccagcct
caggcctcagccttggccacagtcaaagccagcatcatcagtgaactcagctccaagctt
cagcaatttggaggctcctcggcggctggtggcgctctgccctgggcccggggaggcagc
gggggaagcggggacagccaccacgggggagctagctacatcccagagaggacctcttcc
ctgcagcggcagagactctccgaagactcccagtcctcgctcctctccaaacccgtcagc
agcctgtttcagaactggcccaaaccacccttgccgccactccccgccggaagtggggtc
tccccttccgccgctgcggctcccggggccacctcgccctcagcctcctcctccacgtcc
agccgccacctccagggcgtggagttcgagatgcggccccctctgctccgccgggcgccc
agcccctcgctgctgcccgcctcggagcacaaggtcagccctgcgccccggccctcgtcc
ctgcccatcctgccttccggacccctctatccgggtctctttgacatccgcggctccccc
accggaggggcaggaggctcggccgaccccttcgcccctgtctttgtgccaccgcacccc
gggatgtccgggggtctcgggggagctctgtcaggggcctcgcgctccctctcgccgacg
cgcctgctttcgctgcccccggacaagccgttcggcgctaaacctctggggttctggacc
aagttcgacgtggctgactggctcgagtggctgggcttggccgagcaccgggcccggttc
ctggaccacgagatcgacggctcccacctgcccgccttgaccaaggaggactacgttgat
ctgggggtgaccagggtgggccaccgcatgaacatcgaccgggctctcaagtttttcctg
gagaggtga
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