Equus caballus (horse): 100147196
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Entry
100147196 CDS
T01058
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
ecb
Equus caballus (horse)
Pathway
ecb04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100147196 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100147196 (SOX17)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100147196 (SOX17)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
100147196
NCBI-ProteinID:
XP_023504370
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Position
9:complement(29808815..29813813)
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AA seq
406 aa
AA seq
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MSSPDAGYASDDQSQTRSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYSYAQASDYGVPPEPPAGPMHPRLGPETAGPAMPGLLAPPSALHMYYGAM
GSPAAGGGRSFQMQPQQHPPGPGQPSPPPEALPCRDGADPSQPAELLGEVDRTEFEQYLH
FVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcgggatacgccagtgacgaccagagccagacccggagcgcgctg
cccgcggtgatggccgggctgggcccttgcccctgggccgagtcgctgagccccctcggg
gacatgaaggtgaagggcgaggcggcggcgagcagcggggcgccggccggggccgcgggt
cgagccaagggcgagtctcgcatccggcggccgatgaatgccttcatggtgtgggctaag
gacgagcgcaagcgcctggcgcagcagaacccagacctgcacaacgctgagttgagcaag
atgctgggcaagtcgtggaaagcgctgaccctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccatcccaactacaaataccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggattcctgcacggcctcgcc
gagccgcaggcggccgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttcccggagcagggcttccccgcgggcccgccgttgctgcccccgcacatgggc
ggccactaccgtgactgccagggcctgggcgcacccccgctcgacggctacccgctgccc
acgcccgacacctcccccctggacggcgtggagccggatccggccttcttcgccgcgccg
ctgcccggggactgtccagcggccggcccctacagctatgcgcaggcctcggactacggg
gtgcccccggagccacccgccggccccatgcacccccggctcggccccgagacggcgggc
cctgcaatgccgggcctcctggcgccccccagcgctctgcacatgtactatggcgcgatg
ggctcgccggcggcggggggcgggcgcagcttccagatgcagccgcagcagcacccgccg
ggcccggggcagccgtcgccccctcctgaggcgctgccctgccgggatggcgcggacccg
agccagcccgctgagctcctcggggaggtggaccgcacggaatttgaacagtatctgcac
ttcgtgtgcaagcccgagatgggtctcccctaccagggacatgactctagtgtgaatctc
cccgacagccacggggccatttcctcggtggtgtcggatgccagctctgcggtatattac
tgcaactatcctgacgtttga
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