Equus caballus (horse): 100147498 Help Entry 100147498         CDS       T01058                                  Symbol CROCC Name (RefSeq) rootletin isoform X1   KO K16469   rootletin Organism ecb  Equus caballus (horse) Brite KEGG Orthology (KO) [BR:ecb00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ecb03037]     100147498 (CROCC) Cilium and associated proteins [BR:ecb03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100147498 (CROCC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rootletin ATG16 Motif Other DBs NCBI-GeneID:  100147498 NCBI-ProteinID:  XP_023491424 LinkDB All DBs Position 2:complement(36804049..36852390) Genome browser AA seq 2018 aa AA seqDB search MSLGLEGSSEAQPALETLIQTLESNVLGLGQEKGLSVQDPAQECQLACLPARIREIVTRN FSQPESPAPLPTPEMASMLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERL EQAVRLESGELETQEPRGLARQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQV KILQYKKKCSEMEQQLLERSTELEQQRLRDTEHSQDLESALIRLEEEQQRSASLAQVNAM LREQLDQASSANQALSEDIRKVTSDWTRSRKELEQREAAWRREEESFNTYFSSEHSRLLL LWRQVVGLRQLVSEVKMSTERDLLQLGGELARTSRAVQEAGLGLSAGLRLAESRAEAALE KQVLLQAQLEEQLRDKVLQEKELAQLQVQSSLDKADLSARVKELALTVERLQNQNLEKDR VNKALTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDMESGVQLSGSEHTAD ASDGSLRGLSGPRTPSPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDM RGRYEASQDLLGTLRKQLSDSESERRALEDQLQRLRDKADGATQAHEDAQREAQRLRSNV DLLSREKDSLAHSLQAAQQQAEELRQEREKLQATQEELRRQRDRLEEEREDAAQDGARTR RELERSHRQLEQLEGKRSGLAKELVEVREALGCATLQRDVLQAEKAEVAEALTKAEAGRV ELELSMTKLRAEEASLRDSLSKLSALNESLAQDKLGLNRLVAQLEEEKAALLGRQRQVEQ EAALAREEQERLEQLRLEQEVERQGLEGSLRAAEQARESLEHQLPALRQERSRLQEQLAQ LSRQLNGREQELEQARREMQRQVEALERAAREKEALAKERAGLAVQLAAAEREGRTLSEE ATRLRVEKEALESGLFEVQRQLAQLEARREQLEADGQALLLAKETLTGELAGLRLQMTTA EEKVALDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEVERAQLQS QLQQEREELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKL MGTQHSLAAVSLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQLEEATAAHAQEVKRL REQARDVGRQRDSCLREAEELRTQLRLLEDAREGLRRELLEAQRRVREGQDGREAQRQEA GELRRSLSEGAKELEALRRSNEELRAAVKKAESERVSLKLANEDKEQKLALLEEARAAVG KEAGELRAGLQEVERSRLEARRELQELRRQMKMLDSENARLGRELAELQGRLVLGERAEK EGRREALGLRQKLLKGEASLEAVRQEVLGAQRKLQEQEGEFRARERSLLGSLEEARGAEK QQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEAQRRAAEAQLGGLRS ALRRGLGLGRAPSPAPRPAPGSPARSVPAGGSGEGLRSPSPLERSPGAEPPSPGPATSPA SPDLDPEAVRGALREFLQELRSAQRERDELRVQMSALSRQLAELEAQRDNATSRARQLQK AVAESEEARRSVDGQLSGAQAELALQEESVRRSERERRAALDQVATLERSLQATESELRA SQEKVSKMKANEVKLESDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQ AQALQDRVDSLQRQVADSEVKAGTLQLTVDRLNGALAKVEESEGALRDKVQGLTEALAQN SASLASAQDKNLHLQKALTACEHDRQVLQERLEAARQALSEARKQSSSLGEQVQTMRGEL ADVELQRAEAEGRLQQLQEVLRQREEGEAMALHTVQKLQDERRLLQERLGSLQRALAQLE AEKREAERSALRLEKDRVALKKTLDKVEREKLRNHEDTVRLSAEKGRLDRTLTGAELQLA EAQRQIQLLEAQVVTLEQDQSPAQLEADEQQQLELQQEVERLRSAQVQTERTLEARERAH RQRVRGLEEQVSTLKGQLQQELRRSSASFSPPSGPSEK NT seq 6057 nt NT seq  +upstreamnt  +downstreamnt atgagcttggggctggaggggtcgtccgaggcccagccggcgctggagacccttatccag acactggagagcaatgtcctggggctgggccaggagaagggcctgagcgtgcaggaccca gcccaggagtgtcagcttgcctgcctgcctgcccgcatcagggagattgtcacccgcaac ttctcccagcctgagagcccagcccctctgccgaccccagagatggcatcgatgctgtcg ctgcaggaggagaaccagctgctgcagcaggagctgtcccgcgtggaggacctgctggcc cagagccgggccgagcgtgatgagctggccatcaagtacaatgcggtcagcgagaggctg gagcaggctgtgcggctggagtccggggagctggaaacacaggagcccagggggctggca cggcagagcgtggagctgcgcaggcagctgcaggaggagcaggcctcctaccggcgcaag ctgcaggcctaccaggagggccagcagaggcaggcccagcttgtgcagcggctgcaggtc aagattctccagtacaagaagaagtgctcggagatggagcagcagcttctggagagatcc acggagctggagcagcagcggctgagggacacagagcacagccaggacctggagagtgcc ctcatccgcctggaggaggagcagcagaggagcgccagcctggcccaggtgaatgctatg ctccgagagcagctggaccaggcgagctcggccaaccaggctctgagtgaagacatccgc aaggtgaccagcgactggactcggagccgcaaggagctggagcagcgggaggcagcatgg aggcgcgaggaggagtccttcaacacctacttcagcagcgagcacagccgcctgctcctc ctctggaggcaggtggtgggactccgacagctggtcagcgaggtgaagatgtccactgag agggacctgctgcagctgggaggggagctggcccggacctcacgagccgtccaggaggca ggcctggggctgagtgcaggcctgcggctggccgagagccgggccgaggcggccctggag aagcaggtgctgctgcaggcccagctggaggagcagctgcgggacaaggtgctccaggag aaggagctggcccagctgcaggtgcagagcagcctggacaaggctgacctcagtgccagg gtgaaggagctggccttgacagtggagcgccttcagaaccagaatctggagaaggatcgg gtcaacaaggccctcaccgagaagctggaggccctggagtccctgcggctccaggagcag gcggccctggagacagaggatggagaggggctgcagcagaccctgagggacctggcacag gccgtcctgtcggacatggagagcggcgtccagctaagcggctccgagcacacggcggac gcgtcggacggcagcctgcgggggctctcgggcccccggaccccgtccccgccgcggcgc tcctcgcccggccgcggccgttccccccgccgaggcccgtcccccgcctgctccgactcc tccacgctcgccctcatccactccgccctgcacaagcgccagctgcaggtccaggacatg cgggggcgctatgaggccagccaggacctcctgggcaccctgcggaagcagcttagtgac agcgagagcgagcgccgcgccctagaggaccagctgcagcgtctgcgggacaaggccgac ggggccacccaggcccatgaggacgcccagcgcgaggcccagcgcctgcggagcaatgtc gacctcctgagcagggagaaggacagcctggcccacagcctgcaggcggcccagcagcag gcagaggagctgcggcaggagcgggagaagctgcaggcgacccaggaggagctgcggcgc cagcgggaccggctggaggaagagcgggaggacgccgcgcaggacggcgcgcggacgcgc agggagctcgagcgcagccatcgacagctagagcagctggaagggaagcgctcagggctg gcaaaggagctggtggaggtgagggaggcgctgggctgtgccacgttgcagcgggacgtg ctgcaggcggagaaggccgaggtggccgaggcgctgaccaaggccgaggctggccgcgtg gagctggagctctcaatgaccaagctgagggccgaggaggcctccctgcgggactccttg tccaagctgagcgccctcaacgagagcctcgcccaggacaagctgggtctgaaccgcctc gtcgcccagctggaagaggagaaggcggccctgctgggccggcagcggcaggtggagcag gaggccgccctggcccgggaggagcaggagcggctggagcagctgcggctggaacaggag gtggagcggcagggcctggagggttccctgcgggcagcagagcaggcccgggagagcctg gagcaccagctccccgcgctccgccaggagcgcagccggctgcaggagcagctggcccag ctctcccggcagctgaacgggagggagcaggagctggagcaggcacggcgggagatgcaa cggcaggtggaggcgctggagcgggcagcccgggagaaggaggcgctggccaaggagcgg gccggcctggcagtgcagctggcggcagctgagcgagaagggcggaccctgtcggaggag gccacacgcctgcgcgtggagaaagaggccctggagagcggtctgttcgaggtgcagcgg cagctggcccagctcgaggcccgccgggagcagctggaagcagacgggcaggccctgctg ctggccaaggagaccctgactggggagctggcgggcctgcggctgcagatgaccactgca gaggagaaagtggctctggacaaggagctgatggcccagaagctggttcaggctgagcgg gaggcccaggcctctctgcgggagcagcgggcagcccatgaggaggacttgcagcgactc cagcgagagaaggaggcggcgtggcgggagctggaggtagagcgggcccagctgcagagt cagctgcagcaggagcgggaagagctgctggcccggctggaggccgagaaggaagagctg agcgaggagatcgcggccctgcagcaggagcgggacgagggcctcctcctggccgagagc gagaagcagcaggccctgtccctgaaggagtctgagaagacagcgctgtcagagaagttg atgggtacccagcacagcctggccgctgtctccctggagatggagcggcagaagcgagat gctcagagccggcaggagcaagaccggagcaccgtgaatgccctgacatccgagctgcgg gacctgcgggcccagctggaggaggccaccgcggcccacgcccaggaggtgaagaggctg cgagagcaggcccgcgacgtgggccggcagcgagactcctgcctgcgtgaggcagaagag cttcggactcagctgcgcctgctggaggacgcccgcgagggcctgcggcgggagctgctg gaggcccagcgcagggtccgcgagggccaggatgggcgcgaggcccagcgccaggaggcg ggtgagctgcggcgcagcctgagcgagggtgccaaggagctcgaggccctgcggcggtcc aacgaggagctacgggccgcagtgaagaaggctgagagcgagcgcgtcagcctgaagctt gccaacgaggacaaggagcagaagctggcgctcctcgaggaggcccgggcggccgtgggc aaggaggccggggagctgcgggctgggctgcaggaggtggagcgctcgcggctggaggca cggagggaactgcaggagctgcggcggcagatgaagatgctggatagtgagaatgccagg ctgggccgggagctggcggagctacagggtcgcctggtgctgggcgagcgggcagagaag gagggccgacgggaggccctgggcctccgacagaagctgctgaagggcgaggccagcctg gaggccgtgcggcaggaggtcctgggagcccagcggaagctgcaggagcaagagggcgag ttccgggcccgcgagcgaagcctgctgggctccctggaggaggcgcgcggcgccgagaag cagcagctggaccacgcccgcgggctggagctgaagctggaggcggcgcgggccgaggcc gcggagctggggctgcggctgagcgcggccgagggccgagcgcaagggctggaggccgag ctggcccgcgtggaggcgcagcggcgcgcggccgaggcccagctgggtggcctgcgctcg gccctgcgccggggcctgggcctcggccgcgcgcccagccccgccccgcggcccgcgccc ggctccccggcccgcagcgtgcccgccggaggaagcggggaagggctcagaagcccgagc cccttggaacgcagccctggggccgagccaccatccccaggacctgccacctcaccggct tcaccagacctggacccagaggcagtgcgaggggccctccgggaattcctgcaggagctg cggagcgcccagagagaacgggacgagcttcgagtccagatgagtgccctgagtcgtcag ctggctgaattggaggcccagagggacaacgccacctcacgggcaaggcagctgcagaag gctgtggccgagagtgaggaagcccggcgcagtgtggatggccagctgagcggggcccag gcagagttggcgctgcaggaggagagcgtgcggcgcagcgagcgggagcgccgggccgca ctggaccaggtggccaccctggagaggagcctgcaggccaccgagagtgagctccgggcc agtcaggagaaggtcagcaagatgaaggccaacgaggtgaagctggagagcgacaagcgg cgcctgaaggaggtgctggacgcctccgagagccgcaccgtcaaactcgagctgcagcgg cgctcactcgagggagagctgcagcgcagccgcctgggcctgagtgaccgtgaggcccag gcccaggccctccaggaccgggtggactccctgcagagacaggtggcagacagtgaggtg aaggcagggactctgcagctgacagtggatcggctgaacggggccctggccaaggtggag gagagtgagggggccctgcgggacaaggtgcagggcctgacagaggcgctggcccagaac agcgccagcctcgccagcgcccaagacaagaacctgcacctgcagaaggccctgaccgcc tgcgaacatgaccgccaagtgctccaggaacggctggaggccgctcggcaggcgttatcc gaggcgcggaagcagagcagctccctgggcgagcaggtgcagacgatgcggggcgagctg gcggacgtggagctgcagcgggcggaggccgagggtcggctgcagcagctacaggaggtg ctgcgacaacgggaagagggagaggccatggccctgcacacggtccagaaactgcaggat gagcggcggctgctgcaggagcgcctgggcagcctgcagcgagccctggctcagctggag gccgagaagcgggaggcggagcggtcagccctgcggctagagaaggaccgagtggccctc aaaaagacgttggacaaggtggagcgggagaagcttcgcaaccacgaggacacagtgcgg ctgagtgcggagaaggggcgcctggaccgcaccctcacgggggccgagctgcagctggct gaggctcagaggcagatccagctgctggaggcccaggtagtgacactggagcaggaccag agcccagcccagctggaggcggatgagcagcaacagctggagctgcagcaggaagtggag cgcctgcgcagtgcccaggtgcagacggagcgcacgctggaggcgcgggagcgggcccac cggcagagggtgcgtgggctggaggagcaggtgtccacactgaaggggcagttgcagcaa gagcttcgaaggagctcagcatccttctctccaccctccggcccctcagagaagtga

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