Equus caballus (horse): 100629161
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Entry
100629161 CDS
T01058
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein isoform X1
KO
K19538
retinitis pigmentosa 1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecb03037
]
100629161 (RP1L1)
04812 Cytoskeleton proteins [BR:
ecb04812
]
100629161 (RP1L1)
Cilium and associated proteins [BR:
ecb03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100629161 (RP1L1)
Cytoskeleton proteins [BR:
ecb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
100629161 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
100629161
NCBI-ProteinID:
XP_023492018
VGNC:
50757
LinkDB
All DBs
Position
2:complement(59021136..59144653)
Genome browser
AA seq
1959 aa
AA seq
DB search
MNGTPKDAQAPSHRGCLLPSVARTPSVTQITPAKKITFLKRGDPRFAGVRLAVHQRNFKS
FGSLMDELSQRVPLSFGVRSVTTPRGLHGLSALEQLEDGGCYLCSDKKPPKTPNGPGQPQ
GRSPSQQSQDFEGRCEVPGTSSSCRGLKAPRRIILVKNGDPRVQQTVVLSHRNTRNLMAF
LSKASSLLHFPVKQVYTTNGKKVDSLRGLLCSSSVLVCAGHESFRPLAMEDARRNGTETL
PGQTSRNKNGSWGPKAKQSVIHSRARSGSRRFSLLSEKSGLSDPPVSLHHAWMGLAPDRH
PQDTPAQLGPLVAGDDVEKKVRMNEDGSLSVEMKVRFHLLGEDMLQWSRRVGRASPLTAA
GGEGPVLGEVDSLHRMWEGHPGGCSEPGARPLGPCKTGCKETSDRGRWQPGSRYEIWTNP
LYASQGERTASRRRTRLTPHSHSRSPWSQGVTGRKRSSKDSFSPASSDRHPEDSEPNSSC
CSSSLEGSKGSCGLHPASGAASPRGAGQGAGSRPWAAGGPGQGASPGPEGAGPGSRARGA
AGALSDSSASSGPHEESSEKDEWPQGHPSKMKAVTSLQKATPGGGPHSPTVSPSSLRNED
PQAEECGQSTGHRQARAGSGMRLSPALGLPGSGDAVGGCSPPSSCISAPGGRRKQESRAR
AVSSPSISGLSEGAQRGRPRQRGNQRATHCPLDSPVSRQVLGPPSGGRACPAGPTPHLSE
SASSARNQASWDPGPPPSASFHSQDARGISSAPITPVSNSDCTSNFYPPYSPSAETEGDP
EFRAHSPAPIPSNISDSLSSRADGLGEKAGGDVPKPSWPLVLPVQQPEGRKPGAHRGGCC
SHIGTSPVPGTPGGKTQALQGSQPRGHCLVCSRYCPTPPRAQPSVKKHPPHSSSHSDGDR
SADWAPGGDQRGEEKLDSRHPRPPSSQSGAMRRGSPSLGSRPGRMFHGKAAGGGESLEEH
EEGSGTMPGALPRVSPEAVVREWLSNIPEEPLPMKYEMVEESTDVAGDCLEGSMEDPVDK
HSPEGLEGSTQAGQALLEEAASEKAEPDGSPPATGDAGPESGEGLSGSGVSEVTKEAGAG
KGVAVDCGAGQCMLPRRVSASIQIMKALMGSKQGRPSSLPEVSSTVGRRRSHSAQALITC
LASLHFFDDDLGSPAGKVRFIDSPRYQELLSTFRALCPGCGLRRGELDSGLQELGWCQVL
PGLRSQAVTEDFTPTSSSGVDVGSGSGGSGEGSGPGAVDCTLVPERMELPLKIPSEDSRT
PENPEDLGNQQLSGSEASSNSQALACAARKEGAERSSVEQTVGSDLDQAVESTMQEEGVP
SEQVKEEEERAELQQEGVEGFPEEARVTGQELSGAGSQDGERTQEDKSLQEEEAGRDPPS
AVLHPPERREKPTGPPRSLRERDPNASGSPSGPMAEPGWEKLPRAAEAGPEQSQAKSTQG
TGEKGTSTARRASLDPDALWVSTLLRKMQKAFMAHLASATAELRARWSLQSNDLLDQMVA
ELQQDIGQRLQNSTEKELLKLHSRAGGKAPGPHREAVRRETSLQTEQRRHRLQGLRNLSA
FTEQTRSWGPPSLSLEDMSTLSGAPGIRLGGEATGEEFCPCEACMRKKVVPTSPKDVTGV
ASAPIKEAFDLQQILQKKKGGCASGNTAETAPEKRGWEPLQRDPSGTGTVRRADGGLELG
SGQSPGAEGQEEGEGSQTLGRDEDPPGGREEAAAQKGEGKTDSCVGSDPEGAGWEEQGMD
EKGETTEERSGAEDCSEGEASGGGDKSPGRQDDGAETVEAQEAAGQRQPESGGGNQGEKE
GSPPGSPGQGQSGEASGNSSSGQEGRPTPPPTPGGDTPCRRSGPKPGLSSSSTASLGNCS
QLSQNSSEEEPSNGDTRSTEDESKGDPGQERKVTGVHPESSTSEQDGVPSGSRTPEPGAG
GGSDLEMEKVGKSLAFPEVSVANFPTDRTGGFGQDDLDF
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaccccgaaggatgcccaggccccgagccaccgtgggtgcctcctgccttct
gtggcccgaaccccctctgtcacccagatcacaccagccaagaagataaccttcctcaag
cgaggggacccgcggtttgctggggttcgcctggctgttcaccagcgcaacttcaagagc
ttcggctctctgatggatgaactttctcagcgcgtgcctctctcctttggagtgcgctct
gtcaccacaccccggggcctgcacggcctcagtgccctggagcaactggaggacggtggc
tgctacctctgctctgataaaaagccccccaagactcctaatgggccgggccaaccacag
gggagaagcccttctcagcagtcgcaggatttcgaaggccgttgtgaggtaccaggaacg
tcttcttcctgcaggggtctcaaggccccaaggaggataatactggttaagaatggggac
cctagagtccagcagacagtagttctcagccacagaaatacgaggaacctgatggctttt
ctcagcaaagcatccagtcttctgcactttcccgtgaagcaggtgtacacaaccaatggg
aaaaaggtggattcactgaggggtctgctatgcagctcctcagtgctggtgtgtgccggc
cacgagtccttcagacctctggcaatggaagatgccagaagaaatgggactgaaacttta
cctgggcagacatcaaggaacaaaaatgggagctgggggccaaaggccaagcagagcgtg
atccactcgagggccaggtcgggcagcagacggttttccttgctgtcggagaagtctggt
ctcagcgacccccccgtgtccctgcatcatgcctggatgggccttgcccccgacagacac
cctcaggacacgcctgcccagctgggcccgttggtggccggtgacgacgtggagaagaaa
gtccgcatgaacgaggatggcagcctgtctgtggagatgaaagtgcgcttccacctgctc
ggggaggacatgctccagtggtccaggagggtcgggagggccagtcccctcacggcagcc
ggtggggagggccctgtcctgggggaggtggactcccttcaccgcatgtgggagggccac
cctggggggtgctcagagcctggggcacggccactggggccctgcaagacaggatgcaag
gaaacctctgaccgaggccggtggcagccggggtccagatatgagatctggacgaacccc
ctgtacgcctcccagggagagaggacagcctctcggaggaggaccaggctgaccccgcac
tcccactccaggagcccctggagccaaggggtcaccggcaggaagagaagcagcaaggac
agcttcagccctgcctctagtgacagacaccctgaagactctgagccaaattcctcttgc
tgctccagctccctggagggcagcaagggcagctgtggcctgcatccggcctctggggct
gcctccccgagaggagcagggcagggagccggcagcaggccctgggctgcagggggccca
ggccagggagccagcccggggccagagggagcaggcccgggcagcagggcccggggtgcg
gcaggggctctttcggactcttcagcaagttcagggcctcatgaggagtccagtgagaag
gatgagtggccccagggccacccaagcaagatgaaggctgtgacttccctgcaaaaggcc
accccggggggaggcccccattcgcccaccgtgagtccatcgtctctaaggaatgaggac
ccacaggcagaggagtgtggacagagcacagggcaccgtcaggccagggctggatctggg
atgaggttgtccccggctctgggccttcctggctctggggatgctgtaggaggctgttcc
ccaccttcctcttgtatctcagccccaggagggagaagaaagcaggagagcagagccagg
gctgtgtcctcacccagcatttctggcctcagtgaaggtgcccagagaggccgccccagg
cagcgtggcaaccagagggccacccactgcccgctcgactcacctgtgtccagacaggtg
ctggggcctcccagcggaggcagggcctgtccagctggcccaacaccacacctttctgaa
agcgcatccagtgccaggaatcaggcctcctgggacccagggccacccccctctgcctct
tttcattcccaggacgcacgagggatcagcagtgcccccattacccctgtgagcaactct
gactgtacttccaatttctaccccccatactctccctctgctgagacggaaggggaccct
gaattcagggcacattcaccagctcccataccttccaacatatccgactctttgagctcc
cgagctgatggcctgggtgaaaaggcagggggtgatgtccccaagccttcctggcctttg
gttctgccagtccaacagcctgagggaaggaagccaggagcccaccgaggtggctgctgc
tctcatatcggcacatccccggtgcctgggacccctggtggtaagacacaggccctgcag
ggctcccaaccacggggccactgcttggtgtgcagcaggtactgtcccactcccccgagg
gcccagccctctgtcaagaaacaccccccacacagcagcagccacagcgatggagaccgc
agtgctgactgggcgccgggtggtgatcagcggggggaggaaaagcttgactcacgccac
ccacggcctcccagctctcagtcgggggccatgagaaggggcagccccagcctaggttcc
aggcctgggagaatgttccatgggaaggctgccggtggaggggaaagcctggaggagcat
gaggaaggcagcggcacgatgccaggcgctctgccccgagtctcaccggaagccgtggtc
cgcgagtggctgagcaacatcccagaggaacccctgcccatgaaatatgaaatggtagag
gagagcacggatgtggctggggactgcttggaaggttccatggaggaccctgttgacaaa
cattccccagaaggcctggaaggatcaactcaggccggacaagcactcctggaagaggct
gccagtgagaaagcagaaccagatggatcccctccagcgactggagatgctggtcctgag
tcaggagagggtctttctggcagtggagtttcagaagtcaccaaagaggctggagcaggc
aaaggagtggctgtggactgtggtgcaggccagtgtatgcttccccgcagggtctctgcc
tccatccagatcatgaaggcgctgatgggctccaagcagggccggcccagcagcctgccc
gaagtgtccagcacggtgggcaggaggcgcagccactccgcccaggccctcatcacctgt
cttgccagtctccacttctttgatgacgaccttgggtctcccgcgggcaaagtgaggttc
atagactctccacggtaccaggagctcctgagcaccttccgggccctgtgccctgggtgt
ggcctccggcgaggcgagctggactcaggcctccaggagctcggctggtgccaggttctg
ccgggcctcaggtcccaggccgtgactgaggacttcacgccaacgtcatcgtctggcgtg
gatgtcggcagtggctctggaggctcaggggagggcagtggacctggtgccgtggactgc
accctggttcctgagaggatggagctgcccttgaagatcccctctgaggattccaggacc
ccagagaacccagaggatctgggaaaccaacagctgagtggttccgaggcctcctcaaac
tcccaagcattggcttgtgccgccaggaaggaaggggcagaaagaagcagcgtggagcag
acagtgggcagtgacctggaccaagcagttgaaagcaccatgcaagaagagggagtgcca
tcagaacaggtaaaagaagaagaagaaagagcagaactgcaacaagagggtgtcgaagga
tttccagaagaggcaagagtcacgggacaagaactgtcaggggctggctctcaggatggg
gagcggacacaggaagataagagcttgcaggaagaggaagcaggaagagaccctccctct
gcagtactgcaccctccagagaggagagagaaaccgacagggccccctaggagcctcaga
gagagggacccaaatgccagtgggagtccaagtggccccatggctgagcctggttgggag
aagctgcccagagcagctgaggcaggccctgagcaaagccaggccaagtccacccagggg
actggggagaaaggcacttctacagcccgtagagcatctctggatcctgacgccctctgg
gtgtccacgttgttgaggaagatgcagaaggccttcatggcccaccttgccagtgccaca
gctgaactccgagcccgatggagcctgcagagcaatgacctactggaccagatggtggcc
gagctgcagcaggacattggccagcggctccaaaacagcactgagaaagagctcctgaag
ctccatagccgggccggggggaaggcgccgggaccgcacagggaagctgtcaggcgggag
acgtccctgcagacagagcagcgcaggcatcgcctccagggcctgcgcaacctctcagcc
ttcaccgagcagacccgaagctgggggcccccctccctgtctcttgaggacatgtcgacc
ctcagtggagccccggggatccggctgggtggggaggccactggggaggaattctgcccc
tgcgaagcctgcatgaggaagaaagtggttcctacgtccccaaaggacgtcacgggggta
gccagcgcacctatcaaagaggcctttgacttgcagcaaattctgcagaagaagaaagga
ggatgtgctagtgggaacacagcagagacagcccctgagaaaagagggtgggagccactt
cagagggacccctcggggacggggactgtccggagagctgatggaggcctggagctgggc
tcaggccagagccctggggcggaggggcaggaggagggtgagggcagccagaccctcggc
agagatgaagatcccccagggggaagagaggaggcagctgctcagaagggagaagggaaa
acagattcctgtgtaggcagcgaccccgagggagctgggtgggaggagcagggcatggat
gagaagggagaaaccacggaggagcgctctggggctgaggactgttcggagggtgaagcc
tcaggaggaggtgacaaaagtccaggccgacaggatgatggtgccgaaaccgtggaggcc
caggaagctgcagggcagagacagccagagtcaggaggaggaaatcaaggtgagaaagaa
ggcagcccaccgggtagcccggggcagggccagtcgggtgaggcttctggaaacagcagc
tcaggccaagaggggaggccaacgccaccccccaccccaggtggggacaccccctgccga
agatccggcccaaaaccaggcctgtcctcctccagcactgcatctctgggaaactgctct
cagctctctcagaacagctctgaagaagagccttcgaacggagacacgaggagcactgaa
gacgagagcaagggagaccctggtcaagagagaaaagtcacaggagtgcatccagaaagc
tccacctctgagcaagatggggtcccctcgggctccaggactccagagccgggggcaggc
gggggctctgacttagaaatggagaaggtagggaaaagtctcgctttcccagaggtgagc
gttgcaaacttccccacggacaggacaggcggctttggccaagacgacttagatttctag
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