Equus caballus (horse): 100629585
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Entry
100629585 CDS
T01058
Symbol
LSM6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6 isoform X2
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100629585 (LSM6)
09123 Folding, sorting and degradation
03018 RNA degradation
100629585 (LSM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100629585 (LSM6)
03041 Spliceosome [BR:
ecb03041
]
100629585 (LSM6)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100629585 (LSM6)
mRNA degradation factors
5'-3' decay
Lsm complex
100629585 (LSM6)
Spliceosome [BR:
ecb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100629585 (LSM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
100629585
NCBI-ProteinID:
XP_003364554
Ensembl:
ENSECAG00000021036
VGNC:
19822
LinkDB
All DBs
Position
2:complement(86803586..86814335)
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcggaagcaaacccccagtgacttcttaaagcaaatcatcggacgaccagtc
gtggtaaaattaaattctggagtagattatcgaggggtcctggcttgcctggatggctac
atgaatatagccttggagcagacagaagaatatgtaaatggacaactgaagaataaatat
ggggatgcgtttatccgaggaaacaatgtgttgtacataagtacgcagaagaggaggatg
tga
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integrated database retrieval system