Equus caballus (horse): 100629852
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Entry
100629852 CDS
T01058
Symbol
SMOC1
Name
(RefSeq) SPARC-related modular calcium-binding protein 1 isoform X1
KO
K24354
SPARC-related modular calcium-binding protein
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100629852 (SMOC1)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100629852 (SMOC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
Thyroglob_assoc
SPARC_Ca_bdg
Kazal_2
EF-hand_7
DUF6233
CFAI_KAZAL
Kazal_1
Motif
Other DBs
NCBI-GeneID:
100629852
NCBI-ProteinID:
XP_023483762
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Position
24:15813124..15954915
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AA seq
445 aa
AA seq
DB search
MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDG
RSYESMCEYQRAKCRDSTLGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECSE
DGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKVSFRF
FLTLNSDDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNLRNSEKVHSCDQ
ERQSALEEAQQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVM
PNCESDARAKSAEVDDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSATPTGGGR
FSEPDPSHTLEERVVHWYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCD
LNKDKVISLPELKGCLGVSKEGRLV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgcccgttgcgcccgcctgctcacgccccacttgctgctcgtgttggtgcag
ctgtccccggctcgcggccaccgcaccacgggtccccggtttctcataagtgaccgtgac
cctcagtgcaacctccactgctccaggactcaacccaaacccatctgcgcctccgacggc
aggtcctatgagtccatgtgcgagtaccagcgagccaagtgcagagactcgactctgggt
gtggtacatcgagggagatgcaaggacgctggccagagcaagtgtcgcctggaacgggct
caggccctcgagcaagccaagaagccccaggaggcggtgtttgtcccggagtgcagtgag
gatggctcctttacccaggtgcagtgtcacacttacacggggtactgctggtgtgtcacc
ccagatgggaagcccatcagtggctcttccgtgcagaataaaactcctgtatgttcaggt
tcagtcaccgacaagcccttgagccagggtaactcaggaaggaaagtctcttttcgattc
tttttaaccctcaattcagatgatgggtctaagccgacacccacgatggagactcagcca
gtgttcgacggagatgaaatcacagctcccactctatggattaagcacttggtaatcaag
gactccaaactgaacaacaccaatctaagaaattcagagaaagtccactcatgtgaccag
gagaggcagagtgccctggaagaggcgcagcagaatccccgtgagggcatcgttatccct
gagtgtgcccctggggggctctataagccagtgcagtgccaccagtccactggctactgc
tggtgtgtgctggtggacacagggcgcccattgcctgggacctccacacgctacgtgatg
cccaattgtgagagcgacgccagggccaagagtgcggaggtggatgaccccttcaaggac
agggagctgccaggctgtccagaagggaaaaaaatggaatttatcaccagcctactggat
gccctcaccaccgacatggtgcaggccatcaactcagcaacacccactggaggcggcagg
ttctcagagccagaccccagccacaccctggaggagcgagtggtccactggtacttcagc
cagctggacagcaacagcagcaacgacattaacaagcgagagatgaagcctttcaagcgc
tatgtgaagaagaaagccaagcccaagaaatgtgcccggcgtttcactgactactgtgac
ctgaacaaggacaaggtcatctcgctgcctgagctgaagggctgcctaggtgttagcaaa
gaaggacgcctcgtctaa
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