Equus caballus (horse): 102148845
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Entry
102148845 CDS
T01058
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102148845 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
VWA_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
102148845
NCBI-ProteinID:
XP_023481719
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Position
22:50067836..50101765
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AA seq
1328 aa
AA seq
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MAEWPSSFCRLNTMSARGRPHHGIWLWLWLGVTMGLCQGHGKDVGSGAAWGLWPLPAPSH
PPRPYLPRAEAPQQTSVPPWLPTIPRSCCSQWKTSLSAGSSRLRLSVLPEDRLQMKWRAS
EGGGLGYLVQVKPVAGDPEQEVMLNTKTPKATVGGLSPSKGYSVQIFELTGSGNVLLARR
EFVITDLKSNSVGRSSWRPLGAALEPTPSRMGSLDPEPQVALVPSQDPPTLAGPQFRCTP
PTPVDMIFLVDGSWSIGYGHFQQVKDFLASVIEPFEIGPDKVQVGLTQYSGDPQTEWDLN
AFGTKEEVLAAIRGLRYRGGNTFTGLALTHVLEQNLKPTAGPRPEAATVVILVTDGKSQD
DARTAGHVLKELGVDVFAVGVKNADEEELRLLASQPLDITVHSVQDFPQLGTLAGLLSRL
ICQKVQGRSPRGGPVTPAAAAPAPDPLSALTSLVLTQVTSSSVHLSWSPAPKPPLKHLIV
WRPSKGGIPREVVVEGPTSSAELHNLTSSTEYLVSVFPVYEAGVGEGLRGLATTAPLPPP
QALTLAAVTPRTVHLTWQPAAGATHYLVWCSPAPSKGEADRREVRVGRPEVLLDGLEPGR
DYDVWVQSLRGAEASEGRGVRARTPALASTRLGFSDVSHDSARVFWEATPRPVRLFRVSY
VSSKGGHSGQTEAPGNATSATLGPLSSSTTYTVRVTCLYPGGSSSTLTGRLTTRKVPSPS
QLSVTELPGDEVQLHWAAAAASGVLVYQIKWTPLGDGKAHEISVPGNLGTAVLPGLGRHL
EYEITILAYYRDGARSDPVSLRYAALSRSPPSNLTVASESPNSLRVSWTPPSGHVLHYRL
TYTLASGSGPEKSISVPGPRSHAILPDLLAATKYRVLVSAVYGAGESMAVSATGRTACRA
LHADGSLTGFDLMGAFGLVEKEYASVRGVAMEPSAFGPTRTFTLFKDAQLTRRASDIHPA
ALPPEHTLVFLLRLLPETPREAFALWQMTAEDFQPVLGVLLDASRKSLTYFNHDLRATLQ
EVTFDLPEVRRIFFGSFHKVHVAVGRSRVRLYVDCQKVAERPIGEAGSPPATGFVMLGRL
AKARGLRSSSATFQLQTLQLVCSDSWAEEDRCCELPASKDGETCPAFPSACTCSSESPGP
PGPQGPPGLPGRNGAPGEQGSPGPRGPPGVKGEKGDHGLPGLQGRPGHQGSPGKVGLQGP
KGMRGLEGTAGLPGPPGPRGFRGVAGARGTSGERGPPGVVGPTGLPGPKGERGEKGEPQS
LATVYQLVSQASHMLKFNSFLHESTRPPMPILEAPRPPGTPSEARLPGEGGRGGHRPEAR
GQSLCCPH
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtggccctcctccttctgcaggctaaataccatgagcgcccgggggcgtccc
caccacgggatctggctctggctatggctcggtgtcaccatgggactctgccagggacat
ggtaaggacgtggggtcgggggctgcctggggactgtggcccctgcctgcccccagccac
ccaccgaggccgtacctgcccagggcagaggccccgcagcagacgagcgttcccccctgg
ctccccaccatccccaggagctgctgttcccagtggaagacttctctctctgcagggagc
agccgcctgaggctgtccgtgctgcccgaggaccggctgcagatgaagtggagggcatca
gaggggggcggcctcggctacctggtgcaggtgaagcccgtggcaggggacccagagcag
gaggtgatgctgaacaccaagacccccaaggccaccgtgggcggcctgagcccctccaag
gggtacagcgtgcagatcttcgagctcactggctcaggaaacgtcctgctggctcggagg
gagtttgtgatcacagatttgaagagtaactccgtgggcaggagcagctggaggccactg
ggtgcagccctggagcccaccccttcccgtatggggagcctagaccctgagccccaagtc
gccttggtcccaagccaagacccacccactcttgccggcccccagttccgctgcacgccc
cctacacctgtggacatgatcttcctggtggatgggtcctggagtattggctacggtcac
ttccagcaggtcaaagacttcctggccagtgtcatcgagccctttgaaatagggccggat
aaagtccaagtaggcttgactcagtacagtggagacccccagacagagtgggacctgaac
gcctttggcactaaggaggaggtgctggcagccatccgcggtctccgctacagaggggga
aacacgttcacaggcctggccctgacccacgtgctggagcagaacctgaaacccacagcg
ggtccccgtccagaggcagccacggtggtgatcctggtgacagacggcaagtcccaggac
gatgcccgcactgctggccacgtcctcaaggagctgggagtcgacgtctttgccgtgggc
gtgaagaatgctgatgaggaggagctgcggctcctggcgtcccaaccgctggacatcact
gtccacagtgtgcaggacttcccccagctcggcacgctggccggcctgctcagccgcctc
atctgccagaaggtccagggcaggagcccgcgcgggggcccagtgacgccggcagctgct
gctccggccccggaccccctctctgctctcaccagcctggtcctgactcaggtgacctcc
tccagtgtccacctgtcctggagcccagccccgaaaccacccctcaagcatctgattgtg
tggcggccttccaagggcggcatcccccgggaggtggtggtggaggggcccacctcgtct
gcagagctgcacaacctgacttccagtacagagtacctggtgtccgtgttccccgtctac
gaggccggggtcggcgagggcctgcggggcctggcaaccacagcgcctctgccaccaccc
caggcactgaccctggccgcagtgacgcccagaaccgtgcatctcacctggcagccagcg
gccggggccacccactacttggtctggtgctcgcctgccccctccaagggcgaggcggac
aggagagaggtgcgggtggggcggccagaggtgctgctggacggcctggagccgggcagg
gactacgacgtctgggtacagagccttcgaggggcagaggccagcgagggccggggcgtc
cgcgccaggacccctgccctggcctccaccagactgggcttctcggatgtgagccacgac
tcggcccgtgtgttctgggaggccaccccaagacctgtgcgcctcttcagggtcagctac
gtctccagcaagggcggccactccgggcagacggaggctcctgggaatgccacgtcggcc
accctaggccccctctcctcctccaccacatacaccgtcagagtcacctgcctctaccct
ggtggcagctcctccacactgaccggccgcctgaccacacggaaagtccccagccctagc
cagctgtcagtgacagagctccctggggacgaggtgcagctgcattgggcagccgcagcg
gcatccggcgtgctcgtctaccagatcaagtggacacccctgggagatgggaaggcccat
gagatctctgtccctggcaacctgggcacagctgtcctgcccggcctggggaggcacttg
gagtacgagatcaccatcctggcctactacagggacggggcccgcagcgaccccgtgtcc
ctccgctacgctgccctcagccggagcccaccctccaacctgaccgtggcctccgagtca
cccaacagcttgcgggtcagctggacgcccccgagtggccacgtcctccactaccggctc
acctacacgctggcctcaggctcaggacccgagaaatcgatctctgttccaggacccagg
agccatgcgatactccccgacctgctggcagccaccaagtacagggtgctggtctctgca
gtctacggagcaggggagagtatggctgtgtcagccacaggccggacagcctgccgggcc
ctccacgcggatggctccctcacaggctttgacctgatgggggccttcggcctggtggag
aaggagtacgcctctgtccgcggtgtggccatggagccttcagcgtttggcccgactagg
accttcacactcttcaaggatgctcagctgacacgccgggccagcgacatccacccagcc
gccctgcccccggaacatacacttgtcttcctcctgcgcctgctccctgagacaccccgc
gaggccttcgcactgtggcagatgacggctgaggacttccagcctgtcctgggggtcctg
ctggacgccagcaggaagtcactgacctacttcaaccacgacctcagggccaccttgcaa
gaggtcaccttcgacctgcccgaagtgaggaggatattcttcgggagcttccacaaggtg
cacgtggctgtgggccgctccagggtcaggctctacgtggactgccagaaggtggctgag
aggcccattggggaggctggcagccctcccgccaccggctttgtcatgttggggaggctg
gccaaggcccggggcctccggagcagctctgccacgttccagctccagacgctgcagctt
gtgtgcagtgactcctgggcagaggaggacaggtgctgcgagctccctgcctcgaaggat
ggagagacctgcccggccttcccttctgcctgcacctgctcctcagagagccctgggccc
ccagggccacaaggacctccaggcctccccgggaggaatggagcgccaggagagcagggc
tccccagggcccaggggtccaccaggggtcaaaggcgagaagggggaccatggactcccg
ggcctgcagggccggcccggccaccagggctcccccggaaaggtcggcctccagggacca
aagggaatgagaggcctggaggggactgctggcctgcccggaccccccggacccaggggc
ttccggggtgtggcaggggccaggggcaccagcggggagcgaggacccccaggggtcgtg
gggcccacggggctgccggggcccaagggggagcggggagagaagggcgagccacagtct
ctggccaccgtctaccagctcgtgagccaggcctcgcacatgctgaagttcaactccttc
ctccacgagagcaccaggccccccatgcccatcttggaggcccccaggccccccggcacg
cccagcgaggcccggctccctggagaagggggtcgtggtggtcaccgccctgaggccaga
ggacagtccctgtgctgcccccactga
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