Equus caballus (horse): 102149621
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Entry
102149621 CDS
T01058
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
102149621 (LRBA)
Membrane trafficking [BR:
ecb04131
]
Endosome - Lysosome transport
Others
Others
102149621 (LRBA)
Endosome - Golgi transport
102149621 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102149621 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR55
SUKH_6
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
102149621
NCBI-ProteinID:
XP_023483488
Ensembl:
ENSECAG00000010768
VGNC:
19743
LinkDB
All DBs
Position
2:82615053..83326070
Genome browser
AA seq
2869 aa
AA seq
DB search
MASEDKNVPSPPPTGDDGGGGGKGEETSAEEGALSLKPGLPIRGIRMKFAVLTGLVEVGE
VSNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDVTCQAEVWSMFTAILK
KSIRNLQVCTEVGLVEKVLEKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGD
KGQWPPHAGKLLSVLKHVPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTAVYLFSEALNAAQIFAVYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAF
TYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL
FAQLDYRQYLSDEVDLSICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSH
VSRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQMTLYTYLSTEFI
GTVNIYNTIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLL
MFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRN
GIRVMYKLMASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLI
TMTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLY
HAVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREHQGKVDEEVGQCSSSPIQSIS
GISRDVSVSVASQQSDTKDSSMSPHITTNRDEKSGIEKTSSVESASNIELETHNTSNEEE
KTAQENQELLDEVPLEETLINDTINAGDVEVSSDIIEAVTVSSNSFKTTSKDIMTVSEIT
ASISSPSEEDASEVPEFLDKSVVEEEDDDDYVELKVDSSPTEEASLSTELQDNSLSPPAS
EASGRLDMFSNDCKLIFQEEEPVSKKQTDTETQDSEDSVILTMTASGSSATSSDATASHT
TVQSDIGQVLEEGKETTNFARETKLTSESHANIFESPTTSEQRIAKLDVSSVATDTEKLE
LKASSNTEASRPHQPMLEMSRQQEQPGQGVPPDAVNGQRRDSRSTIFRIPEFRWSQMHQR
LLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILP
LLSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSG
GILRQCLRLVCAVAVRNCLECQQHLQLKTKGDTAKGQKTMHGLIPMGKSAAKSPVDIVTG
GISPVRDFDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQ
NERRSQSLKETGSESGNLSLPDVENAPPASVEESESTSSTRRRDSGIGEETATGLGSNVD
VAPPGAPPSVSAGPDAISEVLCTLSLEVNKSQETKNDRGNELDNKAAPSVPVSKNVNVKD
ILRSLVNIPADGVTVDPALLPPTCLGALGDLSVEQSVQFRSFDRSVIIATKKSAVLPSTL
TTSIPTNVVSVVSSVDSAQASDVGGESPGDRSSNAKLPSVPAVGSVPQDQVSNMSITERL
EHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKASSSVVELVMLLCSQ
EWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESL
CAQYSADKREDEKMCDHLIRAAKYRDHVTETQLVQKIINILTDKHGAWGNSAVSRPREFW
RLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHGQCINHSLPIAAAADEDILAKGKQS
IKSQALGNQNSENEILLEGDDDTLSSVDEKDLENLTGPVSLSTPAQLVAPSVVVKGTLSV
TSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQSTALEIFMAN
RVAVMFNFPDPATVKKVVNYLPRVGIGTSFGLPQTRRISLASPRQLFKASNMTQRWQHRE
ISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNFESEELDLTLPSNFRDLSKPVGALNPK
RAAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRT
FSSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKT
SEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLNSIT
DPVLREAVEAQIRSFGQTPSQLLIEPHPPRGSAMQVYLLLQSPLMFTDQAQQDVIMVLKF
PSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHNFPAHQGAAQDQPYQLPVEIDPL
IASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLIQVV
FGHWDVVTCLTRSESYIGGNCYILSGSRDATLLLWYWNGKSSGIGDNPGSETTTPRAVLT
GHDYEITCAAVCAELGLVLSGSKEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHC
VIFYENGFFCTFSVNGKLQATMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVSDLKQL
FAYPGCDAGIRAMALSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8610 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacaagaatgtcccttccccgccaccaacaggtgatgacgggggaggt
ggagggaaaggagaagaaacctctgccgaagagggtgcattgtccctgaaaccaggactc
cccatcaggggcatcagaatgaaatttgccgtattgacggggttggttgaagttggagaa
gtatccaatagggatattgtagaaactgtctttaacctgttggtaggagggcagtttgat
ttggaaatgaatttcatcatccaagaaggtgaaagtatcatctgcatggtggacctacta
gaaaaatgtgacgttacttgccaagcagaagtctggagcatgtttacagccattctgaag
aaaagcatacgaaatcttcaagtctgcactgaagtaggccttgttgaaaaagtgcttgag
aagattgaaaaagttgacaatatgatagcagatcttttagttgacatgttgggagtgctg
gctagctataatttgacagttcgagaactaaagctattcttcagtaaacttcaaggagat
aaaggacaatggcctccacatgctgggaagttgctatctgtgctaaagcatgtgcctcag
aagtatggtcctgatgcctttttcaactttccaggaaagagtgctgcagctattgcatta
cctcctatagccaaatggccataccagaatggttttacgtttcatacctggcttagaatg
gatcctgtaaataacatcaatgtggataaggataaaccatatttatattgtttcagaacc
agtaaaggtcttggttattctgctcactttgttgggggctgtttgattataacatcaata
aagtcaaaaggaaaaggctttcaacattgtgtgaaatttgatttcaagccacaaaagtgg
tatatggtaactatagtgcacatttataaccgatggaagaacagtgagctacgatgttat
gtgaatggtgagctagcttcctatggagagataacatggtttgtcaacaccagtgatacc
tttgataaatgtttcctgggctcgtcagaaacagcagatgctaatagagtattctgtggt
cagatgactgcagtttacctatttagtgaagcacttaatgcagctcagatttttgctgtt
tatcagttgggcctgggatacaagggtacatttaaattcaaagcagaaagtgacctgttc
cttgctgagcatcacaaacttttattgtacgatggcaagctctctagtgccattgcgttc
acatacaatccacgtgctacagatgcccagctctgtcttgaatcatcccctaaggacaac
ccttcgatttttgttcattcaccgcatgcactcatgctccaggatgtgaaagcagtttta
acacattccatacaaagtgctatgcattccattggaggagtacaagtgctgtttccactt
tttgcacagttggattataggcaatatttatctgatgaggttgacttgagtatatgttca
actttgctggcttttatcatggagttgttgaagaactcaattgctatgcaggagcagatg
cttgcctgcaagggcttcttggtaataggatatagtcttgaaaagtcttccaaatcccat
gtcagcagagcagtacttgaactttgtcttgcattttcaaaatatctgagtaatctgcag
aatgggatgcccctactcaagcaattgtgtgatcacattcttcttaacccagctatatgg
attcataccccagccaaggttcagatgacactctatacttacctgtccacggagttcatt
ggtacagtcaacatatataataccattcggagagttggaacagtgcttctcatcatgcat
acactgaagtactactactgggcagtgaatcctcaggatcgaagtggtattaccccaaaa
ggattagatggaccacgacctaatcaaaaagaaatactttctctacgagcattcttgtta
atgttcattaagcaattagtgatgaaggattctggagtaaaggaagatgaactgcaggcc
attcttaattacctactcactatgcatgaggatgacaatctaatggatgtcctacagctg
cttgttgcattaatgtcagaacatcctaactctatgatacctgcttttgaccaaaggaat
gggatacgtgttatgtataaacttatggcatcaacaagcgaaggaataagagtacaagct
ctcaaagcaatgggctattttttaaaacacctggccccaaaaagaaaagctgaagtcatg
cttggacatggattgttttcattgctagctgaaagactcatgcttcagacaaatttaatc
acaatgaccacgtataatgtcctgtttgagattcttatagaacagatttgtactcaagtt
atacataaacagcatccagatcctgattcttcagtaaagatacaaaatcctcagatacta
aaagtaattgcgaccctacttcgaaattctccccagtgcccagagagcatggaagttcgc
agagcctttctttctgacatgattaaactttttaacaacagtagagaaaacagaaggagc
ttgctacaatgttctgtgtggcaagagtggatgctttctctctgctattttaatcctaag
aattcagatgaacaaaagataacagaaatggtatatgccatattcagaatcctactttac
catgcagtcaaatatgagtggggtggctggcgcgtgtgggtagacaccttatcgatcaca
cattcaaaggtcacttttgaaatacacaaagaaaaccttgccaatatatttagggaacac
cagggaaaagttgatgaagaagtagggcaatgttcttcaagtccaattcagtcaatctct
ggcattagcagagatgttagtgtttcagtagcatcccagcaatcagatacgaaggactct
tctatgtctcctcatatcaccacaaatagggatgaaaagtcaggtattgagaagacaagt
tcagtagaatctgcatccaacattgaactggaaactcataatacatctaatgaagaagag
aaaactgcgcaagaaaatcaggagttactggatgaagtccctttagaagaaacattgata
aatgacacaattaatgcaggagatgtagaagtatcttctgacattattgaagctgtgacc
gtttcctctaattcttttaaaacaactagcaaagatataatgactgtcagtgaaataact
gcttccataagctctccttcagaagaggatgcttcggaggtgccagaattcttggataag
tctgtagtagaggaagaagatgatgatgattatgtggaactgaaggtagatagtagtcct
actgaggaagccagtctatccacagagctccaagataatagtttgtctccacctgcatct
gaagccagtggaagactggacatgtttagtaatgactgcaaattaatatttcaagaggaa
gaacctgtaagtaagaagcaaactgatactgaaactcaagattctgaagattctgtgatc
ttgactatgacagcatcagggtcttcagctacctcgtcagatgctactgcttctcacaca
actgtacaatcagacattggtcaggtactagaggaagggaaggaaacaactaactttgct
agagaaaccaaattaactagtgagtctcatgcgaatatcttcgagtctcctactacttct
gagcagaggattgctaaattggatgtttccagtgttgctacagatactgagaaactggaa
ttgaaggccagttcaaacacagaagcatctcgacctcatcaacctatgcttgagatgtca
aggcaacaggagcagccagggcaaggagtaccaccagatgcagttaatggacaaaggagg
gactctagatctactatctttcgtattcctgagttcagatggtctcaaatgcatcagcgt
ttgctcactgatctactattttcaatagaaacagatatacagatgtggagaagccattca
acaaagacagttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacaca
attcatctcatctctcaagtgatggacaatatggtcatggcttgtgggggtatactgcca
ttgctttcagcagctacatcggctacacatgagctggagaatattgaacctactcaaggc
ctttcaatagaagcctctgtgacattcttgcagaggttaatcagccttgtggatgtgctt
atatttgcaagttctcttggctttactgaaattgaagctgaaaaaaatatgtcttctgga
ggaattttgcggcagtgtctccgactggtgtgtgccgtggcagtaaggaattgcttagag
tgtcaacagcatttacaactgaaaactaaaggagatacagcaaaaggccagaaaacaatg
cacggcctgattcccatggggaaatctgcagcaaagagtccagtggacattgtaactggt
ggtatatctccagtaagagatttcgacaggctcctacaagacatggatattaatcggctt
agggcagttgtcttcagagacatagaggatagcaaacaagctcagtttttagccctggca
gttgtatactttatctctgttcttatggtctcaaagtacagagatattttggaaccccag
aatgaaaggcgtagccagtcattgaaggaaactggtagtgaaagtgggaatttatcactc
cctgatgtagaaaatgcacctccagcatcagtggaagaatctgaaagcacatcatctact
cgaaggagggactcaggcattggggaagaaacagcgactggtttaggaagcaatgtagat
gttgctcctcctggagcacctccaagtgtcagtgcaggcccagatgccatcagtgaggtg
ctgtgcactctttctttagaagtcaataaatctcaggaaaccaaaaatgatagaggaaat
gagttggacaacaaggctgcaccatcagttccagtttcaaaaaatgtcaacgtgaaggac
attctccgaagcttggttaacatacctgcagatggtgtcacagtagatcctgcccttctg
ccaccaacctgccttggagctcttggtgatctatctgttgagcaatctgtgcagttcaga
tcttttgacagaagtgtcatcattgcaacaaaaaaatcagcagtgttaccttccacgctt
actacaagtatacctaccaatgttgtcagcgtggtttcttcagtagattcagcccaagcc
tcagatgtgggaggagaatcacctggtgatagatcatctaatgcaaaattgccgtcggtt
ccagcagttggctcagttccacaagaccaagtttcaaatatgagtattacagagaggctt
gaacatgctttggaaaaagcagctcctcttctgcgagaaatttttgtggattttgcacct
tttctttctcggacacttttgggtagccatggacaagaactgcttatagaaggaacaagt
ctggtttgcatgaaggctagtagctcagttgtggagttggttatgctgctgtgttctcag
gagtggcagaattctattcagaagaatgcaggccttgcttttattgaacttgtcaatgaa
ggaaggttacttagccaaacaatgaaggatcatctagtaagagtagcaaatgaagctgaa
tttatcctcagcagacagagagcagaggatattcacagacatgcggaatttgagtcgctg
tgtgcccagtactctgcagacaaacgagaagatgagaagatgtgtgatcatttgataaga
gcagctaaatatcgagaccatgtgacagaaactcaactagtccagaaaattatcaacatt
ctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcctcgtgagttctgg
cgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaaccctcta
ggatcgacacatcctgaagcgacactaaaaacagccgtggaacatggtcagtgtataaac
cactccttgccaatagcagcagctgcagatgaagatatccttgctaaaggaaaacagtcc
atcaagagtcaggctttaggaaatcagaactcagaaaacgagatcctcttggaaggcgac
gacgatactctgtcatccgtggatgagaaagatttagagaatcttaccggtcctgttagc
ctgagcacaccagctcagctagtggccccctctgttgtagtaaagggcactctttctgtc
acctcctccgaactctattttgaggtggatgaagaagatcctaacttcaagaagatcgac
cccaagattctggcctatacagaagggctgcatggaaaatggctgttcacagagataaga
tcaatcttttctcgtcgttatcttttgcaaagtacagccctggagatctttatggcaaac
agagttgctgtaatgttcaacttcccagaccctgcaacagtaaagaaagttgttaactat
ctacctcgtgttggtattggaaccagttttggattgcctcaaaccaggcgtatctcatta
gctagtccacgtcaactttttaaagcttctaatatgacacaaagatggcaacacagagag
atttcaaattttgagtacttaatgtttctcaacacaatagcaggacgaagttacaatgat
ttaaatcagtatccagtgtttccctgggtcatcactaattttgaatcagaagaactggat
cttaccttgccaagtaacttcagagatttgtccaagccagtaggagctctgaatccaaaa
agagcagcattctttgcagagcgttatgaatcatgggaagatgatcaagttccaaagttc
cactatggtactcattattcaactgcaagttttgttcttgcatggctgctaagaatagag
cccttcacaacttatttcctaaatttgcaaggagggaaatttgatcatgcagatcgaact
ttttcatcaatttccagagcttggcgaaacagtcagcgtgatacgtctgatattaaggag
ttgatccctgaattttattatctccctgagatgtttgtcaacttcaataattataatctt
ggagtgatggacgatgggacagtagtgtctgatgttgaacttcctccttgggccaaaacc
tcagaagaatttgttcgcataaacagattggccctggagagtgaatttgtttcctgccag
cttcatcaatggattgatctcatttttggctataaacagcaaggaccagaagctgttcga
tccctaaatgtattctactacctgacctatgaaggagctgtcaatctgaattcaataact
gatcctgtattgagagaggctgtggaagctcaaatccgaagttttggacagacgccttct
caactactcatagagccccatcctcccagaggttctgccatgcaagtgtatctcctcctg
cagagtccgttgatgttcacagaccaagcccagcaggatgttatcatggtcctaaagttc
ccctccaactcccctgtcactcacgtggcagccaacacccagcctggtttggcgactcct
gctgtgatcacagtcactgctaacaggctatttgctgtgaacaagtggcacaactttcct
gctcatcaaggtgctgcacaagaccagccataccagctgccagtggaaatcgatcctctc
atagccagcaatacaggaatgcacaggaggcaaattactgaccttttagaccaaagcatt
caagtccattcccagtgctttgtcatcacttcagacaaccgctatattctcgtctgcggc
ttctgggataagagtttccgagtgtattctacagacacaggaaaattgatccaagtggtg
tttggccattgggatgtcgtcacttgcctcactcggtctgagtcatatattgggggaaat
tgctacattctctcagggtcacgtgatgcaacccttctgctctggtactggaatggaaaa
agcagtgggattggagataacccaggcagtgagaccaccactcctcgggccgttttgaca
ggccatgactatgagatcacttgtgctgctgtctgcgctgagctaggcctggtgttaagt
ggttcgaaagaaggaccatgtctcatacattccatgaatggagacttgttaaggactttg
gagggtcctgaaaactgtctgaaaccaaaactcattcaggcttcaagagagggtcattgt
gtcatattctatgaaaatggctttttctgtacattcagtgtgaatggaaaactccaggcc
actatggaaacagatgataacataagggccatccagctgagccgggatgggcagtacctg
ctcacaggaggagacaacggcgtggtcatggtctggcaggtgtctgacctcaagcagctc
tttgcctatccaggctgcgatgctggaatccgagccatggccctgtcttatgaccagagg
tgcatcatttctggcatggcctcaggaagcatcgttctgttctacaatgacttcaaccgg
tggcatcatgaataccaaacccgctactga
DBGET
integrated database retrieval system
