Equus caballus (horse): 106780888
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Entry
106780888 CDS
T01058
Name
(RefSeq) protocadherin beta-16
KO
K16494
protocadherin beta
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecb04515
]
106780888
Cell adhesion molecules [BR:
ecb04515
]
Cadherins
Protocadherins
106780888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Cadherin_CELSR2_9th
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
106780888
NCBI-ProteinID:
XP_014586099
Ensembl:
ENSECAG00000001398
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Position
14:complement(34994269..34996969)
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AA seq
795 aa
AA seq
DB search
MEIGWTCNRRQRQVLVFFVLLSMSRARAELGPYSVVEETERGSFVANLGKDLGLGLTEMS
TRGARIISQGNKEHLQLKVQTGDLLINEKLDREELCGPTEPCVLHFQVLMEKPLEIFQAE
LRVKDINDHSPMFTEREMILKIPENSPLGIAFPLSNALDLDVGSNNVENYKISPNSHFQV
LTRNRSDGRKYPELVLDKELDREEEPEILLTLTAMDGGSPPRYGTAQVRIEVVDSNDNAP
EFGQPFYRVHIPENSPVGSLVVTVSASDLDSGVYGKISYTLFQPSEDISKTLEVNSVTGE
IRLRKQVDFETVQSYEVDIKATDGGGLSGKCTLLLQVVDMNDNPPEVTISALTSPIPENT
PEIVVAVFSVSDPDSGDNGKTISSIQDDLPFLLKPSVKNFYTLVTEGSLDRESRAEYNIT
ITVTDMGSPRLKTQHSITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDA
GANAQLTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFGVGATDRGSPA
LSSQARVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYRLLKATEPGLFGVWPHNGEVRTARLLSERDAPKHRLLVQVRDNGEPPRSASVTLHV
LLVDGFSQPYLPLPEAAAEQARADPLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA
SLGGCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLRAGSGTSEFKFLKPIIPNLSSQSRG
KEVEENPSFRNSFGI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggacctgcaatcggagacaaaggcaagtcctagttttctttgttttg
ctgagcatgtctagggcgcgcgccgagttggggccctattcagtagtggaagaaacggag
agaggctcctttgtggcaaatctaggaaaagacctggggttggggttgacagagatgtcc
actcggggggcccggatcatttcccagggaaacaaagagcatttgcagctcaaggtacag
actggggatttgctcataaatgagaaactagatcgagaggagctatgtggtcccactgag
ccttgcgtactacatttccaagtgttaatggaaaaacccttagagatatttcaggctgaa
ctgagggtgaaagacataaatgatcattctcccatgttcactgagagagaaatgattcta
aaaataccggaaaacagtcctctaggaattgcattccctctgagtaatgctctggacttg
gacgtaggaagcaacaatgttgagaactataaaatcagccccaactcccatttccaagtc
ctaacccgcaatcgcagtgacggcagaaaataccctgaactggtgttggacaaagaactg
gatcgggaggaggagcctgaaatcttattaaccctgacagcgatggatggcggctctccg
cctcgatatgggaccgcccaggtgcgcattgaagtggtggacagcaatgataatgcccca
gagtttgggcagcccttctacagggtgcatattcctgagaacagccctgtaggctccctg
gttgtcaccgtctctgccagcgatttagacagtggagtctacggaaaaatatcatacaca
ctctttcagccttcagaagatattagcaaaactttggaggtaaattctgtgacaggagaa
attcgactgagaaaacaagtagattttgaaacagttcagtcttatgaagtggatatcaag
gccactgatgggggaggtctttcgggaaaatgcactcttctcctgcaggtggtggacatg
aatgataatcccccagaagtgaccatatccgcactcaccagccccatcccagagaacacg
cctgagattgtagttgccgttttcagtgtttcagatcctgactccggggacaacgggaag
actatttcctccatccaggatgaccttccttttcttctaaaaccttcagtcaagaacttt
tacaccctggtaacagaaggatcgcttgacagagaaagcagagctgagtacaacatcacc
atcaccgtcacggacatgggatcccccaggctgaaaacccagcacagcataaccgtgctg
gtctccgacgtcaacgacaacgccccggccttcacccaaacctcctacaccctctgggtc
cgcgagaacaacagccccgccctgcacatcggcagcgtcagcgccacagacacagacgca
ggcgccaacgcccagctcacctactcgctgctgccgccccaagacccgcacctgcccctg
gcctccctcgtgtccatcaacgccgacaacggccacctgttcgccctcaggtcgctggac
tacgaggccctgcaggccttcgagttcggcgtgggcgccacggaccgcggctcgccggcg
ctgagcagccaggcgcgggtgcgcgtgctggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgccccgggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccggctgctcaaggccacggagccggggctgttcggcgtgtggccgcac
aacggcgaggtgcgcacggccaggctgctgagcgagcgcgacgcgcccaagcacaggctg
ctggtgcaggtcagggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcccagccctacctgccgctgcccgaggcggcggccgagcag
gcgcgggccgacccgctcaccgtctacctggtcgtcgcgctggcgtcggtgtcgtcgctc
ttcctcctgtcggtgctgctgttcgtcgcggtgcggctgtgcaggaggagcagggccgcg
tcgctgggtggctgctcggtgcccgagggcccctttccgggccacctggtggacgtgagt
ggcaccgggaccctgtcccagagctaccagtatgaggtgtgtctgagggcaggttcaggg
accagcgagttcaagtttctaaaaccaattatccccaatctctcatcccagagcagagga
aaggaagtggaagaaaatccctcgtttaggaatagctttgggatttaa
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