Equus caballus (horse): 106782823
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Entry
106782823 CDS
T01058
Symbol
SSU72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106782823 (SSU72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
106782823 (SSU72)
03019 Messenger RNA biogenesis [BR:
ecb03019
]
106782823 (SSU72)
Enzymes [BR:
ecb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106782823 (SSU72)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106782823 (SSU72)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106782823 (SSU72)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
106782823
NCBI-ProteinID:
XP_023491765
LinkDB
All DBs
Position
2:48417458..48448928
Genome browser
AA seq
194 aa
AA seq
DB search
MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTT
YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCRDLFDLILTCEERVYDQVV
EDLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE
EKSGRAFLHTVCFY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtcgccgctgcgggtggcggtggtgtgctcgagcaaccagaaccggagcatg
gaggcgcacaacatcctcagcaaacgaggattcagtgtccggtcctttggaacaggaact
catgtgaagcttccaggacccgcacccgacaagccaaatgtttatgatttcaaaaccaca
tatgatcagatgtacaatgatctccttaggaaagacaaagaactctacacgcagaacggc
attttgcacatgttggacagaaataagagaatcaagccccggccagaaaggttccagaac
tgcagagatctgtttgatcttatcctcacctgtgaagagagggtgtatgaccaggtggtg
gaagatctgaattccagagagcaggagacctgccagccggtgcacgtgatcaacgtggac
atccaggacaaccatgaagaggccaccctgggggcgttcctcatctgtgagctctgccag
tgtattcagcacacggaggacatggagaacgagatcgacgagctgctgcaggagttcgaa
gagaagagcggcagggccttcctgcacaccgtctgcttctactga
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