Equus caballus (horse): 791241
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Entry
791241 CDS
T01058
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain precursor
KO
K19719
collagen type II alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04974
Protein digestion and absorption
ecb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
791241 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
791241 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
791241 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
791241 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
791241 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
791241 (COL2A1)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
791241 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
791241
NCBI-ProteinID:
NP_001075233
Ensembl:
ENSECAG00000022313
VGNC:
16737
UniProt:
Q28396
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All DBs
Position
6:complement(66515614..66546985)
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AA seq
1418 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAG
EQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDE
KAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPG
KPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKG
ESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG
APGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGAAGNPGTDGIPGAKGSAGAPGIAG
APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEG
KRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPG
RPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKG
ANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPG
PPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDG
PKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTG
PIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKG
EQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPG
SNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDG
PPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTG
PAGEPGREGTPGADGPPGRDGAAGVKGDRGEAGALGAPGAPGPPGSPGPAGPTGKQGDRG
EAGAQGPMGPAGPAGARGLPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSG
DQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPG
PPGPPGPGIDMSAFAGLGPREKGPDPLQYMRADEAAGGLRPHDEEVEATLKSLNNQIESI
RSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPA
NVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNI
TYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTT
IEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgatacgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccggcagccaggaccgaagggacagaaaggagaacct
ggagacatcaaggatattgtaggacccaaaggacctcctggacctcagggacctgcaggt
gaacaaggacccagaggtgatcgtggtgacaaaggagaaaaaggtgcccctggacctcgt
ggcagagatggagagcctgggacccctggaaatcctggcccccctggtcctcctggcccc
cctggtccccctggccttggtggaaactttgctgcccagatggctggaggatttgatgag
aaggctggtggcgcccagatgggagtaatgcaaggaccaatgggccctatgggaccacgt
ggaccaccaggccctgctggcgctcctggacctcaaggatttcaaggcaaccctggtgaa
cctggggaacccggcgtctctggtcccatgggtccccgtggtcctcctggcccccctgga
aaacctggtgatgatggtgaagctggaaagcctggaaaatctggtgaaagaggccctcct
ggccctcagggtgctcgcggcttcccgggaaccccaggccttcctggtgtcaaaggtcac
agaggttacccaggtctggatggtgctaagggagaagccggtgctccaggtgtgaagggc
gagagtggttccccgggtgagaatggttctccgggcccaatgggtccccgcggcctgcct
ggtgagagaggacggactggccctgctggcgctgcaggtgcccggggtaacgatggtcaa
ccaggccccgcagggcctccgggtccagtaggtcctgctggcggtcctggattccctggt
gctccgggtgccaagggtgaagctggccccactggtgctcgtggtcctgaaggtgctcaa
ggtcctcgtggcgaacctggtactcctgggtccccagggcctgctggtgctgctggtaac
cctggaactgatggaattcctggagccaaaggatctgctggtgctcctggcattgctggt
gctcccggcttccctggtccccgtggtcctcccggccctcaaggtgcaactggtcctctg
ggcccgaaaggtcagacgggtgaacctggtattgctggcttcaaaggcgaacaaggcccc
aagggagaacctggccctgctggtccccaaggagcccctggtcctgctggtgaagaaggc
aaaagaggtgctcgtggagagcctggcggtgctgggcctgtcggtccccctggagaaaga
ggtgctcctggcaaccgtggtttcccaggtcaagatggtctggccggtcccaagggagcc
cctggagagcgagggcccagtggccttgctggccccaagggagccaatggtgaccctggc
cgtcccggcgagcctggccttcctggagcccggggtctcactggtcgccctggtgatgct
ggtcctcaaggcaaagttggtccctctggtgcccctggtgaagatggtcgccctggacct
ccaggtcctcagggggctcgtgggcagcctggtgtcatgggtttccctggccccaaaggt
gccaatggcgagcctggcaaagctggtgaaaagggactgcctggtgctcctggtctgaga
ggtcttcctggcaaagatggtgagacaggtgctgcaggaccccccggacctgctggacct
gctggagaacgaggcgagcagggtgctcctggaccgtctgggttccagggacttcctggc
cctcccggtcccccaggcgaaggtggaaaaccaggtgaccagggtgttcccggagaagct
ggagcccccggcctcgtgggtcccaggggtgaacgaggtttcccaggtgaacgtggctct
cccggcgcccagggcctccagggtgcccgtggcctccccggcactcctggcactgatggt
cctaaaggtgcatctggcccagctggcccccctggggctcagggtcctccaggtctgcag
gggatgcctggtgagaggggagcagctggtatcgccgggcccaagggagacaggggtgat
gttggtgagaaaggccctgagggagcccccggcaaagacggtggacgaggtctgactggt
cccattggcccccctggcccggctggcgccaacggtgagaagggagaagttggacctcct
ggtcctgcaggaactgctggtgctcgtggtgccccgggcgaacgtggagagactggaccc
cccggacccgctggattcgcaggtcctcccggtgctgatggccagcctggtgctaagggt
gagcaaggagaggccggccagaaaggtgatgctggtgccccaggtcctcagggcccctct
ggagctcctgggcctcagggtcctactggtgtgactggtcctaaaggagcccgaggtgct
caagggcccccgggagccaccggattccccggagctgctggccgtgtcggacccccaggc
tccaatggcaaccctggaccccccggtccccctggtccttctggaaaagatggtcccaaa
ggtgctcgaggagacagcggtccccccggccgagctggtgaccctggccttcaaggtcct
gctggaccccctggcgagaagggagagcctggagatgatggtccctctggtcctgacggt
cctccaggtccccagggtctggctggacagaggggcatcgttggtctgcctgggcagcgt
ggtgagagaggattccccggcctgcctggcccatcgggcgagcctggcaagcagggagct
cctggagcatctggagaccgaggtccccctggacccgtgggtcctcctggcctgactggt
cctgctggtgaacctggacgagagggaacgcctggtgctgatggcccccctggcagagat
ggtgcagctggagtcaagggtgatcgtggtgaggctggtgccctgggtgctcccggagcc
cctggaccccctggctctcctggccctgccggcccaactggcaagcaaggagacagagga
gaagctggtgcacaaggccccatgggacctgcaggaccagctggagcccgaggattgcca
ggccctcaaggtccccgaggtgacaaaggagaagctggagaggctggcgagaggggactg
aagggacaccgtggcttcactggtctgcagggtctgcctggccctcctggtccttctgga
gaccaaggtgcttctggtcctgctggtccttctggccctagaggtcctcctggccccgtc
ggtccctctggcaaagatggcgctaatggaatccctggccccatcggacctcctggcccc
cgtggacgttcaggcgaaactggccccgctggtcctcccggaaatcctggaccccctggc
cctccaggtccccctggccctggcatcgacatgtccgcctttgctggcctgggcccgaga
gagaagggccctgaccccctgcagtacatgcgggctgacgaggcggctggcggcctgaga
ccgcatgacgaggaggtggaggctacactcaagtccctcaacaaccagatcgagagcatc
cgcagccccgagggctcccgcaagaaccctgctcgcacctgccgggacctgaaactctgc
caccctgaatggaagagcggagactactggattgaccccaaccagggctgcaccttagac
gccatgaaggttttctgcaacatggagactggcgagacctgcgtctaccccaacccagcg
aacgttcccaagaagaactggtggagcagcaagagcaaggacaagaaacatatctggttt
ggagaaaccatcaacggtggcttccacttcagctatggagatgacaacctggctcccaac
actgccaacgtccagatgaccttcctgcgtctgctgtccaccgagggctcccagaacatc
acctaccactgcaagaacagcattgcctacctggacgaagcagctggcaacctcaagaag
gccctgctcatccagggctccaatgacgtggagatccgggctgagggcaacagcaggttc
acgtatactgtcctgaaggatggctgcacgaaacacaccggtaagtggggcaagactacg
attgagtaccggtcacagaagacctcgcgcctgcccatcattgacattgcacccatggac
ataggagggcctgagcaggaatttggtgtggacatagggcccgtctgcttcttgtaa
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integrated database retrieval system
