Escherichia coli O6 K2 H1 CFT073 (UPEC): c0025
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Entry
c0025 CDS
T00106
Symbol
nhaR
Name
(GenBank) Transcriptional activator protein nhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecc03000
]
c0025 (nhaR)
Transcription factors [BR:
ecc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
c0025 (nhaR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
EFG_III
Motif
Other DBs
NCBI-ProteinID:
AAN78525
UniProt:
A0A0H2V3Z8
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Position
22058..22981
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AA seq
307 aa
AA seq
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MLSGREMSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFK
RKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVL
DAAVVEDEQIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSMKIGECGVSF
WCTNPLPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFG
ATHNAIFVAPSLYANDFYNDDSVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSA
LFTPASK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgttatcagggagagaaatgagcatgtctcatatcaattacaaccacttgtattacttc
tggcatgtctacaaagaaggttctgtggttggcgcagcggaggcgctttatttaacacca
caaaccattaccgggcagatccgggcgctggaagagcgcctgcaagggaaactatttaag
cgtaaaggacgtggtctggaacccagcgaactgggggaactggtctatcgctatgccgat
aaaatgttcaccttaagccaggaaatgctggatatcgtcaactatcgcaaagagtccaac
ttattgtttgatgttggtgtggcagatgcactttccaaacgtctggtcagcagtgttctg
gatgccgcagttgtggaagacgagcagatccatctacgctgtttcgaatcgacgcacgag
atgcttttagagcagttgagtcagcataaactggatatgatcatctctgactgtccgatc
gattccactcagcaggaagggctgttttccatgaaaattggcgaatgtggtgtcagtttc
tggtgcactaacccactaccagaaaagccgtttcctgcctgtcttgaagagcgtcgttta
cttattccggggcgtcgctcaatgttggggcgtaagctattaaactggtttaactcccag
ggcttgaacgtcgaaattttgggtgagtttgatgatgctgcgttgatgaaagcctttggg
gcgacgcataacgctattttcgttgcaccttcgctttacgctaatgatttctataacgat
gactcggttgtggagataggccgtgttgagaacgtgatggaagagtaccacgcgattttt
gccgaaaggatgattcagcaccctgcagtacagcgtatctgcaatacagactattctgcg
ctgtttactccagcttcaaaataa
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