Escherichia coli O6 K2 H1 CFT073 (UPEC): c0224
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Entry
c0224 CDS
T00106
Symbol
ldcC
Name
(GenBank) Lysine decarboxylase, constitutive
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc00310
Lysine degradation
ecc01100
Metabolic pathways
ecc01110
Biosynthesis of secondary metabolites
ecc01120
Microbial metabolism in diverse environments
Module
ecc_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
c0224 (ldcC)
Enzymes [BR:
ecc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
c0224 (ldcC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAN78716
UniProt:
A0A0H2V490
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All DBs
Position
219713..221854
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY
TNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRGEFTRDSIEEKVAATTQAQWPVH
AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF
ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFSDAD
ANHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH
DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM
PGEMLTEESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccattatgggaccgcatggcgtcttttataaagatgagcccatcaaa
gaactggagtcggcgctggtggcgcaaggctttcagattatctggccacaaaacagcgtt
gatttgctgaagtttatcgaacataacccacgaatttgcggcgtgatttttgactgggat
gagtacagtctcgatttatgtagcgatatcaatcaacttaatgaatatctcccgctttat
gccttcatcaacacccactcgacgatggatgtcagcgtgcaggatatgcggatggcgctc
tggttttttgaatatgcgctggggcaggcggaagatatcgccattcgtatgcgtcagtac
accaacgaatatcttgataacattacgccgccgttcacgaaagccttgtttacctacgtc
aaagagcggaagtacaccttttgtacgccggggcatatgggcggcaccgcatatcaaaaa
agcccggttggctgtctgttttatgattttttcggcgggaataccctcaaggcggacgtc
tctatttcggtcaccgagcttggttcgttgctcgaccacaccgggccacacctggaagcg
gaagagtacatcgcgcggacgtttggcgcggaacagagttatatcgttaccaacggaaca
tcgacgtcgaacaaaattgtgggtatgtacgccgcgccatccggcagtacgctgttgatc
gaccgcaattgtcataaatcgctggcgcatctgttgatgatgaacgatgtagtgccagtc
tggctgaaaccgacgcgtaatgcgttggggattctgggtgggatcccgcgcggtgaattt
actcgcgacagcatcgaagagaaagtcgctgccaccacgcaggcacaatggccggttcat
gcggtgatcaccaactccacctatgatggcttgctctacaacaccgactggatcaaacag
acgctggatgtcccgtcgattcacttcgattctgcctgggtgccgtacacccattttcat
ccaatctaccagggtaaaagtggtatgagcggcgagcgtgttgcaggaaaagtgatcttc
gaaacgcagtcgacccacaaaatgctggcggcgttatcgcaggcgtcgctgatccacatt
aaaggtgagtatgacgaagaggcgtttaacgaagcctttatgatgcataccaccacctcg
cccagttatcccattgttgcttctgttgagacggcggcggcgatgttgcgtggtaatccg
ggcaaacggctgattaaccgttcagtagaacgagctctgcattttcgcaaagaggtccag
cggctgcgggaagagtctgacggctggtttttcgatatctggcaaccgccgcaggtggat
gaagccgaatgctggcccgttgcgcctggcgaacagtggcacggctttagcgatgcggat
gccaatcacatgtttctcgatccggttaaagtcactattttgacaccggggatggacgag
cagggcaatatgagcgaggaggggatcccggcggcgctggtggcaaaattcctcgacgaa
cgtgggatcgtagtagagaaaaccggcccttataacctgctgtttctctttagtattggc
atcgataaaaccaaagcaatgggattattgcgtgggttgacggaatttaagcgctcttac
gatctcaacctgcggatcaaaaatatgctgcccgatctctatgcagaagatcccgatttc
taccgcaatatgcgtattcaggatctggcgcaagggatccataagctgattcgtaaacac
gatcttcccggtttgatgttgcgggcatttgataccttgccggagatgatcatgacgcca
catcaggcatggcagagacagattaaaggcgaagtagaaaccattgcgctggaacaactg
gtcggtagagtatcggcaaatatgatcctgccttatccacccggcgtaccgctgctgatg
ccgggagaaatgcttaccgaagagagccgcacggtactcgattttctactgatgctttgt
tccgtagggcaacattaccccggttttgaaacggatattcacggcgcgaaacaggacgaa
gacggtgtttaccgcgtacgagtcctaaaaatggcaggataa
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